| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5483 |
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| Symbol | |
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| ID | 7975177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 185417 |
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| End bp | 186109 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796070 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002947344 |
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| Protein GI | 239820159 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCGA AGGCCATGGA GACCATGCTC CGCGAGAGCT TGTGGGCGCA GACCCTGGCG
GCCGAGGAAC TCGACCGCGT GGTGCGCGAG TCGTACGAGC GCGAGGTGCC GGCCGGCGGT
TTCGTGATGC GCCGCGGCGA GCCCGCGGAT CTCTGGCTCG GCGTCATCGA GGGCCTGGTG
AAGATGTCGC TCTCGCTGGC CGATGGCCGC GTCTCCACAT TCACCGGCGT GACCTCCGGC
GGCTGGGCCG GCGAAGGCTC GCTGCTGAAA CCCGGCCCCT GGCGCTACGA CGGCGTGGCC
ATGCGTCCGA CGCGCGTGGC CTGCGTGCCG CGCCATACCT TCGAACGCCT GGTGTCGACG
AACCTCGATT TCGACCGGTT CCTGCTGTCG CACATCAATG CCCGCCTGAG CCTGTTCATC
GGACTCATGG AGTTCGACCG CCTGCTGGGC CCCGACGCGC GCATTGCACG CTGCCTGGCC
AGCCTGTTCG ACCCGATCCT CTATCCGCAG GCGAGCAGCT TCGTACGCCT GACCCAGGAC
GAGATCGGCC TCCTGTCCGC GGTCTCGCGC CAGCGCGCCA ACCGGGCGCT GCATGCGCTC
GAGCGCGCAG GCCTGCTGCG GGTGGAGCAC GGCGGGGTCG AGGTGATCGA TCTTGAAGGG
CTGCGCAACT ACGTTGGTGA AGGGAGCTCC TAG
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| Protein sequence | MPSKAMETML RESLWAQTLA AEELDRVVRE SYEREVPAGG FVMRRGEPAD LWLGVIEGLV
KMSLSLADGR VSTFTGVTSG GWAGEGSLLK PGPWRYDGVA MRPTRVACVP RHTFERLVST
NLDFDRFLLS HINARLSLFI GLMEFDRLLG PDARIARCLA SLFDPILYPQ ASSFVRLTQD
EIGLLSAVSR QRANRALHAL ERAGLLRVEH GGVEVIDLEG LRNYVGEGSS
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