| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5473 |
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| Symbol | |
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| ID | 7975167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 174277 |
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| End bp | 174996 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796060 |
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| Product | Pirin domain protein |
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| Protein accession | YP_002947334 |
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| Protein GI | 239820149 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.699876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGAAA TTCGCAGCGC CAATGACCGC GGACTTGCAG ACTTCGGCTG GCTCAAGTCC
CGCCACACCT TCTCTTTCGG CCACTACCAC GACCCGAAGC AGGAAGGCTT CTCCGACCTG
CTGGTGATCA ACGACGACCG CGTGCATCCG GGCCGCGGCT TCGGCACCCA TCCACACCGC
GACATGGAAA TCTTCTCGTA CGTGCTCGAC GGCGCGCTCG AGCACAAGGA CTCGATGGGC
ACCGGCTCGG TCATCCGCCC GGGCGACGTT CAGATGATGA GCGCCGGTAC CGGCGTGCGC
CACAGCGAGT TCAATTCCTC CTCCACCGAT CCGCTGCATT TCCTGCAGAT CTGGATCGTG
CCCAACGCCA AGGGCGTAGC GCCCCGCTAC CAGCAAGTGC ACTTCGCACC CGAGGAAAAG
CGCGGCCGGC TGCGGCTGAT CGTCTCGCCG GAGGGTGCCG GCGGCTCGCT TGCCGTGCAC
CAGGACGCCC GCGTCTACGC CGGCCTGTTC GACGGCGATG AAGCCGCCTC GCTCGCGCTC
GGCCCCGATC GCCATGCCTA TGTGCATGTG GCACGCGGCA GCGTGGAAGT GAACGGCCAG
CGGCTGGGCG AGGGCGACGG CGCGCGGGCG CGCGGCGAGC AGCGGCTCGA GCTGGCGCGC
GGCGAGGGCG CCGAGGTGCT GGTGTTCGAC CTGCGCCCGA AAGAGTTGCC TTCCTTCTGA
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| Protein sequence | MLEIRSANDR GLADFGWLKS RHTFSFGHYH DPKQEGFSDL LVINDDRVHP GRGFGTHPHR
DMEIFSYVLD GALEHKDSMG TGSVIRPGDV QMMSAGTGVR HSEFNSSSTD PLHFLQIWIV
PNAKGVAPRY QQVHFAPEEK RGRLRLIVSP EGAGGSLAVH QDARVYAGLF DGDEAASLAL
GPDRHAYVHV ARGSVEVNGQ RLGEGDGARA RGEQRLELAR GEGAEVLVFD LRPKELPSF
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