| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5456 |
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| Symbol | |
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| ID | 7975150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 159461 |
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| End bp | 159937 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796044 |
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| Product | CMP/dCMP deaminase zinc-binding |
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| Protein accession | YP_002947318 |
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| Protein GI | 239820133 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0590] Cytosine/adenosine deaminases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.637653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGC CCGATCCCAA CGCAGAAAAA TACATGCTTG ACGCCATCCG CCTGGCCATG
CGGAACGTGC GCGAGCGCAG GACCTGGCCC TTCGGTGCCG TGCTGGTGCG CGAAGGCAAG
GTGCTGGCCC GGGCCGTCAA CGAGGTCGAC GCCCTGTGCG ACCCCACGGC CCACGCCGAG
ATGCAGGCCG TGCGCATGGC GGCCAAGGCG CAGGGCGGCA CGGACCTGTC GGGCAGCGTC
GTGTACGCCA GCGGCTACCC GTGTCCCATG TGCCTGACGG CCATGTTCCT GGCCGGCGTG
AAGGAGGTCT GCTACGCCTA CTCCAACGAG GACGGCGAAC CGCACGACCT CTCGGCCGAA
CGCGGCTACC TGGAGATCGC GCGGCCGATC GAGCTGCGCG AGATGCCCGT GCGATCGCTG
CCCGTGCGCG ACGAAGGCGA GGACCTGTAC GACGCCTGGT CACGCGCGAC GCGCTGA
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| Protein sequence | MSQPDPNAEK YMLDAIRLAM RNVRERRTWP FGAVLVREGK VLARAVNEVD ALCDPTAHAE
MQAVRMAAKA QGGTDLSGSV VYASGYPCPM CLTAMFLAGV KEVCYAYSNE DGEPHDLSAE
RGYLEIARPI ELREMPVRSL PVRDEGEDLY DAWSRATR
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