| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5453 |
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| Symbol | |
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| ID | 7975147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 156116 |
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| End bp | 157210 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796041 |
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| Product | aromatic amino acid beta-eliminating lyase/threonine aldolase |
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| Protein accession | YP_002947315 |
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| Protein GI | 239820130 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2008] Threonine aldolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.93399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACA GAACCCTGCA CTTTGCCGAC GCCGGACTGC CGCGCAGTCC ATGCGCGGCT
GGCGCCGTGG TGGACCTGCG CAGCGACACC GTGACGCTGC CGACCCCGTC GATGTACGCC
CGCATGCAAA CAGCCGCGCT GGGAGACGAC GGCCTGGACG GCGACCCGAC CGTGCGCGCG
CTCGAGGCAC TGGCGGCCAG CATGCTGGGC AAGGAATCTG CCCTGTATGT ACCGACCGCC
ACGATGGGCA ACCTCCTGGC CGTGCTGTCG CAGGCGGAGC GCCGGTCGCA GGTCGTGCTC
GAGGAGTCCG CACACATGTT CGTTTCCGAG CGCGGCGGCG CCGTGTTCAG CGGCGTGACC
TATACCGGCA TCCCGGGCGT GGCTGGCGCA ATGGACCTGG AGAGCCTGGC GCTGGTGCTG
AAGTCGTCCG GCGAATTGCG CACGGATCTG GTCTGCATGG AAACGACGCA CGGCAACGCG
GGAGGAGCGG TGCTGCCGCT GGACCACATG CAGGCGGTCT GGAAGGCATC CAGCGAGGCC
GGAGTGCGCG TCCACCTCGA TGGCGCCCGG CTCTTCAATG CCGCCGTGGC GCTGAACGTC
GATCCAGCCG CGATCGCGTG CTGCGCCGAC ACGGTGACCC TCTGCCTTTC CAAGGGCCTG
AGCGCGCCTG CAGGCGCGGT GCTCGCCGGC CCGTCCGCCA CCATGGCCAG CGCCAGACGG
CTGCGCAAGA TGCTCGGAGG CACGCAGCGC CAGATCGGCG TGGTTGCCGC CGCGGGACTG
GACGCCCTGG AAACCATGCC CGGCCGGCTC GCGCAAGACC ATGCTTTGGC GTCGTGCCTG
AGCGAGGCAT TGCGCGCCGT GTTGCCCGGC TCCGTCGGTA TCAGCACGCC GCCCACCAAC
ATCGTCTTCG TCGACCTGCC CGAGGCCGCA GCCGACAGTC TCGCCTGGGC GGAGGCACTC
AAGGAATGCG ATGTCCTGGT CCGCCCGTGG GGTCCGCGCC GGATCCGGCT CGTGACGCAC
CGCCATATCG ACGCGGCCTG CGTGGATGCC GCCGCCACCG GATTCCGGCG TGCCGCGCAA
TCGCTGCTTG CCTGA
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| Protein sequence | MPDRTLHFAD AGLPRSPCAA GAVVDLRSDT VTLPTPSMYA RMQTAALGDD GLDGDPTVRA
LEALAASMLG KESALYVPTA TMGNLLAVLS QAERRSQVVL EESAHMFVSE RGGAVFSGVT
YTGIPGVAGA MDLESLALVL KSSGELRTDL VCMETTHGNA GGAVLPLDHM QAVWKASSEA
GVRVHLDGAR LFNAAVALNV DPAAIACCAD TVTLCLSKGL SAPAGAVLAG PSATMASARR
LRKMLGGTQR QIGVVAAAGL DALETMPGRL AQDHALASCL SEALRAVLPG SVGISTPPTN
IVFVDLPEAA ADSLAWAEAL KECDVLVRPW GPRRIRLVTH RHIDAACVDA AATGFRRAAQ
SLLA
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