| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5452 |
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| Symbol | |
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| ID | 7975146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 155073 |
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| End bp | 156053 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796040 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947314 |
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| Protein GI | 239820129 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.202897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCCA TCTGCCGCCG GGACTTTGTC GCCTCTGCCT TCCTGATGGC CGCCGGCCTG
GGGAGCGGCC GCGCATTCGC CAGCGGCTTT CCCAGCCGGC CCATCCGCCT GATCGTGCCG
TACGGGCCCG GAGGCGGTTC CGATTTTGTC GCGCGCCTGA TTGCCCAGAA ACTGACCGAA
ACGGCGGGGT GGAATGTCGT CGTGGACAAC AAGGCCGGGG CCTCGGGGCT GATCGGCACC
GATGCCGCGG CCAAGAGCGC CGCGGACGGC TACACCTTGT TCCTTGCGGA CGCCGCGCAC
GCCACCAATG CCGCGGTACA GCCCAAATTG CCCTTTGATC CGATCAAGGA TTTCTCGCCG
CTCACGCTCG TGGGCTCTTC GCCGCAACTG CTGGTGGCGC ATCCGTCCCT TCCGGCCAAC
TCGCTGCGCG AACTGATCGC ACTGCCGCGT GCCCGAGTGC GCGAATACGG CGTGGGAACA
CCAGGGCAGG GGTCCGTACC GCACTTGCTG TGCGAGACGC TCAAGCGCAA GACCGGCATG
GAGCTGGTGC ACGTGCCCTA CAAGGGCGGC AGCGCGGCCT TGACCGATGC GGTGGGCGGA
CAGGTTGCCA TGGTGATCAA TTCCGTGCCG GCTTGCATGC CGCACATCGA AGCGAAGAGG
CTCAAGGTTC TTGCCATTGC CAGCGCGACG CGGCATCCGA AATTGCCGGA CGTGCAGACC
TTCTCCGAAA GCGTGCCGGG CATGGTGGGA GGCGCCTGGT ATGGCGTGAT GGCACCTGCC
GGGGTGCCCG CGGATCTGCT GCAGCAGCTG AACGCGGCCG TCGACAAGGT GCTGGAACTG
CCGGAAGTCA AGGCCCGGCT GGAAAGCTCG TTCGTGGATT CCATGCCCCG CGGGCCGCAG
GCGTTCTCCA AGTACCTGAG CGAAGAAATC GCGCGCTGGA AATCGGTCGT GAAAGAGACG
GGGGTCACGG TCAACAGCTG A
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| Protein sequence | MPSICRRDFV ASAFLMAAGL GSGRAFASGF PSRPIRLIVP YGPGGGSDFV ARLIAQKLTE
TAGWNVVVDN KAGASGLIGT DAAAKSAADG YTLFLADAAH ATNAAVQPKL PFDPIKDFSP
LTLVGSSPQL LVAHPSLPAN SLRELIALPR ARVREYGVGT PGQGSVPHLL CETLKRKTGM
ELVHVPYKGG SAALTDAVGG QVAMVINSVP ACMPHIEAKR LKVLAIASAT RHPKLPDVQT
FSESVPGMVG GAWYGVMAPA GVPADLLQQL NAAVDKVLEL PEVKARLESS FVDSMPRGPQ
AFSKYLSEEI ARWKSVVKET GVTVNS
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