Gene Vapar_5437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5437 
Symbol 
ID7975131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp140150 
End bp140731 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content66% 
IMG OID644796025 
ProductYceI family protein 
Protein accessionYP_002947299 
Protein GI239820114 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGACA GCTCCGTACT CTCCACACTC GCCTCGACGA ACCTGGCCGA CATCAGCCGC 
GGACGCTACG TCGTCGATCC CGCACATTCG CAGGTGCTGT TCAGGGTGTC GCACTTCGGC 
ATCTCGACCT ATTTCGGCGA ATTCACGGGC CCTTGCGGCA CGCTCGACAT TCCGCTGTCG 
GCACACGGCA GCGACACGCG GCTCGCGGTG TCCGTGCCCG TCGCCAACGT GAGGACCACG 
AGCCCCATCC TGGACGGCGA ACTCAAAAGC CGCGACTGGC TGGACGCCGA GCGGTTTCCG 
TTGGTCTCCT TCGACTTTGC CGCGCCGCTT TCCCTGGCTG CGAATTCATT CCAGGTGGCC 
GGCGCCCTCG CCCTGCATGG CGTGACGCGC AACGCCACAT TCGACGTGAG CTTCGTCGGC 
GCCGGCATGA ACCCGGCAAA GCAGGTCTAC ACGGTCGGCT TCGACATCCG GGGCCGCATC 
CGCCGCAGCG ACTACGGCGT GACCGCCGCG CTCCCGATGA TCGGCGACGA GCTGGGTCTT 
ATCATCAGTG CGGCTTTCGA GCTCGAAGCC CCTGCCGCCT GA
 
Protein sequence
MPDSSVLSTL ASTNLADISR GRYVVDPAHS QVLFRVSHFG ISTYFGEFTG PCGTLDIPLS 
AHGSDTRLAV SVPVANVRTT SPILDGELKS RDWLDAERFP LVSFDFAAPL SLAANSFQVA 
GALALHGVTR NATFDVSFVG AGMNPAKQVY TVGFDIRGRI RRSDYGVTAA LPMIGDELGL 
IISAAFELEA PAA