| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5430 |
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| Symbol | |
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| ID | 7975124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 135639 |
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| End bp | 136058 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644796018 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_002947292 |
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| Protein GI | 239820107 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAAGA TTGCAAGAAG CATCGGACTG ACACTGCTGT TCGCCGCGGG CGCAGCAACG
GCCCAGAACG CCGCCTCGCA CGGCACGCCC AAGAACGCCA AGGTGACGCC GCTGATGACC
CAGGAGATGA AGGACATCCC CGGCAAGGAA GTGCTGATGA TCACGGTGGA CTATCCGCCG
GGCGCCGTCG ATCCGGTGCA TCGCCACGAC GCCCACAGCT ACGTCTACGT GCTCGAAGGC
TCGATCGTGA TGGGCGTGAA GGGCGGCAAG GAAGTGACGC TGAAGGCCGG CGACACCTTC
TACGAAGGCC CCGACGACAT CCACACCGTC GGCCGCAACG CGAGCAAGAC CAAGCCTGCG
AAGTTCGTCG TCATGCTCGT GAAGAACAAG GGTGCCGAGT TCTTCATTCC AGTGAAATAA
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| Protein sequence | MIKIARSIGL TLLFAAGAAT AQNAASHGTP KNAKVTPLMT QEMKDIPGKE VLMITVDYPP
GAVDPVHRHD AHSYVYVLEG SIVMGVKGGK EVTLKAGDTF YEGPDDIHTV GRNASKTKPA
KFVVMLVKNK GAEFFIPVK
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