| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5373 |
|---|
| Symbol | |
|---|
| ID | 7975834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012792 |
|---|
| Strand | - |
|---|
| Start bp | 79315 |
|---|
| End bp | 79647 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644795967 |
|---|
| Product | malonate decarboxylase acyl carrier protein |
|---|
| Protein accession | YP_002947241 |
|---|
| Protein GI | 239820056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03130] malonate decarboxylase acyl carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00827947 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG TTCCCGCAGG GCTCGAAACC CTGGACTTTT CCTTTTCCGG CGGCTGGCCG
GCCGGCGCCT TTGCGCCGGT GCTGGTCGGC GTGGTCGGCT CGGGCAACCT CGAGGTCATG
CTCGAGCCCG CCGGCGGCGA CGGCTGCGCG GTGCGCGTCG AAACCTCGGC GCGCGGTTTC
GGGCCGATCT GGCAGGCCGT GATGAACGAC TTCCACGCGC GCCATCCGCT GGCCGGTGTG
CGCATCTCGA TCAACGACAT GGGTGCCACG CCCGCCGTGG TGAGCCTGCG CCTGGACCAG
GCGGTGGCCG AGATCGACGG AGGCCGGCCA TGA
|
|---|
| Protein sequence | MSDVPAGLET LDFSFSGGWP AGAFAPVLVG VVGSGNLEVM LEPAGGDGCA VRVETSARGF
GPIWQAVMND FHARHPLAGV RISINDMGAT PAVVSLRLDQ AVAEIDGGRP
|
|---|
| |