| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5337 |
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| Symbol | |
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| ID | 7975798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 39018 |
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| End bp | 39812 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795931 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002947205 |
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| Protein GI | 239820020 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0345321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTCG CACTGGCTTT CGAAGCGCTG GGATCGGGGC CTCCGGTGGT GATCCTGCAC
GGCCTGTTCG GCGCGGGGCG CAATTGGGCG CGGGTTGCAG AGGCGCTGGC CGCGGACCAC
CGCGTCTACT TGCCCGACGC CCGCAACCAT GGCGCCTCGC CGTGGGCCGA ATCCATGTCG
TACGTGGAGA TGGCGGAGGA CGTGCTCGCG CTGATCGAGC AGGAGCAATT GCAGCGGCCC
TTCGTGATCG GGCACAGCAT GGGCGGCAAG ACGGCAATGG CCCTCGCGCT GTCGCATCCG
CAGGCCATCG GCGGCATCGC CGTGATCGAC ATCGCGCCGG AGAGCTACGC CGACCAGTTC
TCGTCGTACG TGTCGGCCAT GCGCAGTCTC GATGTGGCGG GTGCCGCCAG CCGCCGCGAA
ATCCACCAGG CGCTGGCCGA CAGCCTCAAC GCGGAGGCCC CGGTCGACTT CCTGATGCAG
AACCTGCGCC GGCAGAACGA CCGCTTCGAC TGGCGCCTGA ACCTGCTGGC CACGGGCCTG
TGCATGCGCG AGCTCTGCGG CTTCCCCGAC GCCTTGCGCG ACGCGCGCTA CGACGGCCCG
GCGCTCTTCA TCCACGGCGC GGAGTCCGGC TACGTGCGGC CTTCGTCGCT CGCCGGCATC
CGCGCGCTGT TCCCGCGTGC CGGGACCGAG CGCGTCGCGG ACGCCGGGCA CTGGGTGCAT
GCCGACCAGC CCGCGGCGCT GCTGTGCGGG CTGCGCAACT GGCTGGCCGG CGGCGGCACG
GCCGTCCCTC AATGA
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| Protein sequence | MPLALAFEAL GSGPPVVILH GLFGAGRNWA RVAEALAADH RVYLPDARNH GASPWAESMS
YVEMAEDVLA LIEQEQLQRP FVIGHSMGGK TAMALALSHP QAIGGIAVID IAPESYADQF
SSYVSAMRSL DVAGAASRRE IHQALADSLN AEAPVDFLMQ NLRRQNDRFD WRLNLLATGL
CMRELCGFPD ALRDARYDGP ALFIHGAESG YVRPSSLAGI RALFPRAGTE RVADAGHWVH
ADQPAALLCG LRNWLAGGGT AVPQ
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