| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5317 |
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| Symbol | |
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| ID | 7975604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 15199 |
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| End bp | 16074 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795911 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002947185 |
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| Protein GI | 239820000 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.372386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAGC GCATCGACTC GCATCAGCAT TTCTGGCGGC CCGCGCGCGG CGACTACACA
TGGCTGCGCG CCGATGTGCC CGCCCTTGCG CCGCTGGTGC GCGACTTCCT TCCCGAGCAT
CTCGCGCCCC TGCTGCGGGC GCATGGCGTC GAGCGGACCG TGCTGGTGCA GGCCGCCGAT
TCGCAGGCCG AGACCGGCTT CATGCTCGAA CTGGCCAGTG CACACGAGGC GGTGGGCGGC
GTGGTCGGCT GGGTCGACCT GGGCAGCCCC GATGCCGTGG CCTCGCTCGA GCGCATGGCG
CAGCACCCCA AGTTCAAGGG CGTGCGGCCG ATGCTGCAAG ACCTGCCCGA CGACGACTGG
ATCGCGCGCA TGCCGCGTGC CGATGCCATC GAGGCCCTGA TCCGCCTGGG CCTGCGCTTC
GATGCGCTGG TGAAGCCGCG GCACCTGCCC TCGCTGCTGC GCTTCCTGAA AGACTGGCCG
CAATTGCCCG TGGTGATCGA CCACGCCGCC AAGCCGCCCG TGGGCGCGCA CGGCAGCGAA
GCCTTCGCGG CCTGGCGCAA GGACATGGCC GCGCTCGCCG CGCTGCCGCA GGCGTGCTGC
AAGTTCTCCG GGCTCTGGGG CGAGGCGCCG CAGGCGGTGC ACCACGATGT CGATGTGGCG
GTGCGCGCCG TGTGCCCGGT GTGGGAGCCG CTGCTCGAGA GCTTCGGCCC CGCGCGCCTC
ATGTGGGGCA GCGACTGGCC GGTGCTCACC CTGTCCGGCG ACTACGCGGG CTGGATCGCC
GTCAGCGAGG CCTGCATCGG CCGCCTCTCG GACACCGAGC AGTCGCACAT CTGGCGCGGC
ACCGCGCAGC ACTTCTATGG CCTCTCGGCG GACTGA
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| Protein sequence | MRQRIDSHQH FWRPARGDYT WLRADVPALA PLVRDFLPEH LAPLLRAHGV ERTVLVQAAD
SQAETGFMLE LASAHEAVGG VVGWVDLGSP DAVASLERMA QHPKFKGVRP MLQDLPDDDW
IARMPRADAI EALIRLGLRF DALVKPRHLP SLLRFLKDWP QLPVVIDHAA KPPVGAHGSE
AFAAWRKDMA ALAALPQACC KFSGLWGEAP QAVHHDVDVA VRAVCPVWEP LLESFGPARL
MWGSDWPVLT LSGDYAGWIA VSEACIGRLS DTEQSHIWRG TAQHFYGLSA D
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