Gene Vapar_5272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5272 
Symbol 
ID7972705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5595251 
End bp5595730 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID644795866 
ProductBarstar (barnase inhibitor) 
Protein accessionYP_002947140 
Protein GI239818230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATG ACAACGACTT GAGCGGCGCC CCGAAGCGCC CCGAAGAAAT GATGATGACT 
ATGGAAAGAC CAGCGGAGAT GACTTTATCC CTTCGTGCCG TACGCCCGAA CATCGTGCAG
TCGATTCGTG CGTTCCGCGT GAACGACCTG CAGGAAGCCG CCAACGCCGC GGGCCAGCAC
TTCCTGTACG CCAATCTGGG GAACGCCCAG ACCAAGCAGG ACGTTCTGGA CCTGATCGCC
CAGCAGTTCA CCTTTCCGGC GCATTTCGGC AAGAATTTCG ACGCGCTGTA CGACTGCATG
ACCGACCCGT TGCATAAATC GGGCCCGCAG CCCGGCTTCG TGATCGTGCT CGAGCAGATC
CCGGCCAACG CCAAGTTCGA CAAGGAAGCG CGCGAGCAGC TGCTCGACAT CTTCCGCGAT
GCCTCCGATT ACTGGGGAGA CCGGAAAGTC CCGTTCCGCT GCTTCTATTC TTTTCTGTAG
 
Protein sequence
MSDDNDLSGA PKRPEEMMMT MERPAEMTLS LRAVRPNIVQ SIRAFRVNDL QEAANAAGQH 
FLYANLGNAQ TKQDVLDLIA QQFTFPAHFG KNFDALYDCM TDPLHKSGPQ PGFVIVLEQI
PANAKFDKEA REQLLDIFRD ASDYWGDRKV PFRCFYSFL