| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5271 |
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| Symbol | |
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| ID | 7972704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5594844 |
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| End bp | 5595254 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644795865 |
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| Product | guanine-specific ribonuclease N1 and T1 |
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| Protein accession | YP_002947139 |
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| Protein GI | 239818229 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4290] Guanyl-specific ribonuclease Sa |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGGCTT ACGCCTCGAT CACGTCTTCT GTCACTAAGT TTGCGCTCAC CGGCTTGATG
CTGGTGGCAT TGGCGACGGG GGCCGAGGCC CGCGGATGGT TCGGCACCGG AAAGCCCGCC
CAGGAATCGA TTGCACTGTC CGAACTGCCG GTTCAGGGCC AGCGAACCTA CGAAGCCATC
CTGAGTGGCG GCCCCTTCCG ATTCGAAAAG GACGGCACGG TATTTGGCAA CCGCGAGCGT
CTTTTGCCGC CCGCGCGGCG CGGTCACTAC CGCGAGTACA CGGTGGCAAC GCCCGGCTCG
CGCGATCGCG GTGCACGGCG CATTGTCTGC GGCGGAGAAC AGCGCACCAC ACCCGAGGCC
TGCTGGTACA CGGCAGACCA CTACGCGAGT TTCAGACGGA TTGCACCATG A
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| Protein sequence | MAAYASITSS VTKFALTGLM LVALATGAEA RGWFGTGKPA QESIALSELP VQGQRTYEAI
LSGGPFRFEK DGTVFGNRER LLPPARRGHY REYTVATPGS RDRGARRIVC GGEQRTTPEA
CWYTADHYAS FRRIAP
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