| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5255 |
|---|
| Symbol | |
|---|
| ID | 7972688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 5575963 |
|---|
| End bp | 5576271 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644795849 |
|---|
| Product | Antibiotic biosynthesis monooxygenase |
|---|
| Protein accession | YP_002947123 |
|---|
| Protein GI | 239818213 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1359] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.083215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCACG TCGTCGCCGT CATCACCGCC AAGCCGGGCC AGCGCGCCAG CCTGCTCGAA
GCCTTTGCCG CCAACCGCGC GGCCGTGCTG GCCGAGGAGG GCTGCATCGA ATACGGCGCC
ACGGTCGACG CCGCGGGCGT GCCGGCATCG AAGGCCAGCT TCGGGCCCGA CACCTTCGTG
GTGATCGAGA AATGGGAAAC GCTGGCCCAC CTGCAGGCCC ATGCGGTGGC ACCGCACATG
GCGGCCCACG GCGCGAAGAC GAAGGAGCTG GTCCAGAGCA AGCTGATCCA CGTGCTCGAG
CCGGTCTGA
|
|---|
| Protein sequence | MIHVVAVITA KPGQRASLLE AFAANRAAVL AEEGCIEYGA TVDAAGVPAS KASFGPDTFV
VIEKWETLAH LQAHAVAPHM AAHGAKTKEL VQSKLIHVLE PV
|
|---|
| |