| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5237 |
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| Symbol | |
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| ID | 7969896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5560072 |
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| End bp | 5560935 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795831 |
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| Product | Pirin domain protein |
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| Protein accession | YP_002947105 |
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| Protein GI | 239818195 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG CCGTTGCCAC TGCCACCACC ACCACCGAAG CCCGCGCCAT CGTCTACCGC
ACGCGCGGCT CCCAGCACGG GCCGATCACG CGGCTCATGA GCCCGGGCGA CCTGGGCGAA
TTCCTCAAGC CTTTCGTGTT CCTCGACCTT TTCGGCTTCG ACACTTCGGG CGGCCGCAAG
GGCTTCGGCA TGCACCCGCA TTCGGGCATT GCCACGCTGA CCTGGCTGAT CGACGGCGAC
ACGCGGTACG AGGACACGAC CGGCGAACAG GGCGTGCTGC CGTCCGGCGG CGTCGAGTGG
ATGCGCGCCG GCAACGGCGT GTGGCACGAC GGCGCGCCCG CGCCGGGCAC GAAGCGCGTG
CAGGGCTTCC AGCTCTGGGT GGCCCTGCCG GCCTCGGAAG AAAACGCGCC GGCGCAGAGC
ATCTACCTGT CGCCCTCGCA GGTGCCGCGG GAAGGCCCGG CGCGCGTGCT GCTCGGGCGC
CACGGCGCGG CGCAAAGCCC CATTCCGGCC CCGGCGCCGA TCAACTACCT CGCCGTGCAG
CTGAAGGACG GCGAGCACTG GCGCTACACG CCGCCGGCCG GCCACACGGT GGGCTGGATC
GCGGTTGACG CGGGCCGGCT CGATGCGGGC GGCGGCGAAC CGGTCGCCGC CGGCGAGCTG
GCGGTGTTCG AGGAATCGGG CGCGGCCATC GGCTTCGTGG CCCAAGGCGA CACCTCCTTC
GTGCTGGGCT CGGCCGCGAA GCATCCGCAT GAACTGGTGA TGGGGCACTA CTCGGTGCAC
ACCAGCAAGG CGGCGCTCGA GCAAGGCGAG GCCGAGATCC GCCACATCGG CGCGCGGCTG
CGAGAGGAAG GCCGGCTGCG CTGA
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| Protein sequence | MTTAVATATT TTEARAIVYR TRGSQHGPIT RLMSPGDLGE FLKPFVFLDL FGFDTSGGRK
GFGMHPHSGI ATLTWLIDGD TRYEDTTGEQ GVLPSGGVEW MRAGNGVWHD GAPAPGTKRV
QGFQLWVALP ASEENAPAQS IYLSPSQVPR EGPARVLLGR HGAAQSPIPA PAPINYLAVQ
LKDGEHWRYT PPAGHTVGWI AVDAGRLDAG GGEPVAAGEL AVFEESGAAI GFVAQGDTSF
VLGSAAKHPH ELVMGHYSVH TSKAALEQGE AEIRHIGARL REEGRLR
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