| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5226 |
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| Symbol | |
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| ID | 7969885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5547579 |
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| End bp | 5548634 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795820 |
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| Product | aminoglycoside phosphotransferase |
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| Protein accession | YP_002947094 |
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| Protein GI | 239818184 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.274828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTG CAGAGTTCGC CGACACGCAG GTGCTCAGCG AAGCCTCGCC CGCGCTCGAC
GGCGCCTGGG TGCGCGAACT CGCGCGCGAG CATTACGGCA TCGAAGGCGA GATGAAGCCG
CTGACCGGCG AGCGCGACCG CAACTACCGG CTCGAGCGCG CCGCCGACGG CGCCCGCTTC
ATGCTGAAGA TATCGCACCC GGCCGAGACC GCGCTCGTCG CCGACTTCCA GACCCAGGCC
CTGCTGCATC TCGCGGCCGC CGAGCCGGGC CTGCCGGTGC AGCGCATCGT GCCGGCGCGG
GACGGCGCCG CCTCTTTCGT CTGCGACCCG GGCGACGGCT TGCCGCGCGT GGTGCGCCTT
TTCAGCTACT TGCCCGGCCT GCCGCTGCCC GAGGCGCCGC GCACGCCGCT GCAGCAGCAG
AACCTCGCGC GCATGCTGGC CCGGCTCGAC GTGGCGCTCG CGGGCTTCGA CCATCCGGCC
GGCGACCTGC CGCTGCCCTG GGACCTGCAG CGCGCCGACA GCGTGCGCGG CCTGCTCGCG
CACATCGCCG AGCCGGAGCG CCGCGCCCTG GCCGCCGCCG CGCTCGACCG CTTCGAGCGC
GATGCCAAGC CGGTGCTGCG CACGCTGCCC GCACAGCCGA TCCACAACGA CTTCAACATC
TACAACCTGC TGGTCGACCC GGCCGACACC GACCGCATTG CCGCCATCCT CGACTTCGGC
GACATGGTGC GCGCGCCGTG CATCAACGAC CTGGCCGTGG CCGCCGCCTA CCAGGCCGGC
ACCGGCGACG ATCCGCTCGC GGCCATCGTG CCGCTGGTGG CCGCGTACCA CGCGGTGCGG
CCGCTGTCGC CGGCCGAGAT CGGCGTGCTG TTCGACCTGA TCGCCGCGCG GCTCGTGATG
GTGGTGGCCA TCAGCGGCTG GCGCGCCGCG CGCTATCCCG AGAACGCGCC CTACCTGCTG
CGCAACAACC CGCTGTCGTG GGCGCGGCTG CAGGCTTGCG AGCGCGTCGG CAGCGCCGCG
GCGACAGCAG CCTTTCGCCG CGCGCTGAAC CTCTGA
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| Protein sequence | MTIAEFADTQ VLSEASPALD GAWVRELARE HYGIEGEMKP LTGERDRNYR LERAADGARF
MLKISHPAET ALVADFQTQA LLHLAAAEPG LPVQRIVPAR DGAASFVCDP GDGLPRVVRL
FSYLPGLPLP EAPRTPLQQQ NLARMLARLD VALAGFDHPA GDLPLPWDLQ RADSVRGLLA
HIAEPERRAL AAAALDRFER DAKPVLRTLP AQPIHNDFNI YNLLVDPADT DRIAAILDFG
DMVRAPCIND LAVAAAYQAG TGDDPLAAIV PLVAAYHAVR PLSPAEIGVL FDLIAARLVM
VVAISGWRAA RYPENAPYLL RNNPLSWARL QACERVGSAA ATAAFRRALN L
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