| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5222 |
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| Symbol | |
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| ID | 7969881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5542614 |
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| End bp | 5543528 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795816 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_002947090 |
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| Protein GI | 239818180 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0559955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCAAC CCCGCTGGCA AGGCATCTTT CCCGCCATCA CCACCAAGTT CCACGCCGAC
GAAAGCATCG ATGCCGAAGG CACCGCGCGG CACATCGACT TCCAGATCCG CAACGGCATC
CACGGCCTCG TCACCTGCGG CTCGCTGGGC GAAGCCAGCA CGCTCACGCT CGAAGAGAAG
CTGCAGGTCG CCAAGATCGC GCTCGAAGCC GCCGACGGCC GCATCCCGGT GCTGGCCAAT
GTGTCGGAAA CCAGCACGCG CGAGGCGCTG CGCTACGTGG ACGGGGCCAA CAGGCTCGGC
GTGGCCGGCT TCATGGTGAT GCCCTCGGTG ATCTACGTGG CCGATGCGCG CGAAGCCATG
CTCAACGTGC GCACCATCGC CAACGCGGCG CAAAAGCCCA TCATGGTCTA CAACAACCCG
GTGGCCTACC GCGTCGACCT GAAGCCCGAG CACATGCTGG AACTGGCGGA CTGCGAATGG
ATCGCGGCCA TCAAGGAGAG CTCGGACGAC ATCCGCCGCA TCACCGACCT GCGCAACACG
GTGGGCGACC GCTACCAGCT GTTCCTGGGC GTGGACGACC TGGCCTACGA AGGCCTGGCG
CTGGGCTGCG ATGGCCTCTT GGCCGGCGTG GGCTGCGCAT TCCCGCGCGA GACGGTGGCG
CTGTACGACC TGATGAAGGC GGGCCGCTTC GCCGAGGCGC TGAAGCTCTA CCAGTGGATG
ACGCCGATGC TGCACCTGGA CGTGTCGACC AAGCTGGTGC AGAACCTCAA GCTGATCGAC
GTGCTGGTGG GCGTGGGCAG CGAGCACATG CGCCGCCCGC GGCTGCCGCT CGTCGGCCAG
GAGCGCGCGG CCATCGAGGC CATCGTGAAG AAGGCGCTGG CCACGCGGCC CGTGCAGTAC
CAGTCGGTCG TGTAA
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| Protein sequence | MTQPRWQGIF PAITTKFHAD ESIDAEGTAR HIDFQIRNGI HGLVTCGSLG EASTLTLEEK
LQVAKIALEA ADGRIPVLAN VSETSTREAL RYVDGANRLG VAGFMVMPSV IYVADAREAM
LNVRTIANAA QKPIMVYNNP VAYRVDLKPE HMLELADCEW IAAIKESSDD IRRITDLRNT
VGDRYQLFLG VDDLAYEGLA LGCDGLLAGV GCAFPRETVA LYDLMKAGRF AEALKLYQWM
TPMLHLDVST KLVQNLKLID VLVGVGSEHM RRPRLPLVGQ ERAAIEAIVK KALATRPVQY
QSVV
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