| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5219 |
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| Symbol | |
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| ID | 7969878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5539362 |
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| End bp | 5540468 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795813 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002947087 |
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| Protein GI | 239818177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0233742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCGG ATGCCATCGT CATCGGCGCC GGCATCGTCG GTGCCGCCTG CGCACACGCG
CTCGCGCAGG CCGGCCGCCG GGTGCTGGTG CTCGATGCGC GCGTCGGCGG CGCCACGGGC
GCAGGCATGG GGCACCTCGT GGTGATGGAC GACAACCCGG CCGAGCTTGC GTTGAGCAGC
CATTCGACGG CGCAATGGCG CGCCCTGGCA CCGCGCATGA GCGAGGACTG CGCGTACAGC
GCCTGCGGCA CGCTCTGGAT TGCGGCCAAC GAAGAAGAAA TGGCCGAGGC CGAGCGCAAG
CAGCAGCGGC TGCATGAGCA CGGCATCGAA AGTCGCCTGC TCGGCGCGCT GGAGCTGGCC
CGCGCCGAGC CCGCCTTGCG CAAGGGCCTT GCGGGCGCGC TCGAAGTGCC CGGCGACGGC
ATCCTCTACG CACCGAATGC GGCGCGCTGG CTGCTCGCGC AGGGCGCAGA TTCGATCCGC
ATCGAACATG CGAAGGTCGA TGCGATCGAA GACGACGGCA CGCTGCGGCT CGCCGACGGC
AGCCGCCGCA GCGCGCCGCA GGTCGTGCTG GCCAACGGCA TCGAAGCCAC GGTGCTGTGC
CCCGAACTCC CGATCCGCCC CAAGAAGGGC CACCTGCTGA TCACCGACCG CTACCCGGGC
ACGGTGCACC ACCAGCTCGT CGAGCTCGGC TACGTGACGA GTGCGCACCA CAGCGACGGC
GACTCGGTTG CCTTCAACGT GCAGCCGCGG CCCACGGGCC AGCTGCTGAT CGGCTCCTCG
CGCCAGTTCG ACACCACCGA TCCGGCCGTC GAAGCGCCGA TGCTCGCGCG CATGCTGCAG
CGCGCGATCG GCTACCTGCC GGGGCTTGCG GAGTTCAACG CGGTCCGCTC GTGGACCGGC
CTGCGCGCCG CCACGCCCGA CGGGCTGCCG CTGCTGGGCA AGCACCCCTG GCGCGAGAAG
CTCTGGCTCG CGGTCGGCCA CGAAGGCCTG GGCGTGACCA CCGCGCCGGG CAGCGCACAC
CTGCTCGCGG CGCTGATGAC CGGCGCGGCG CCCGGGTTCG ACGCGGCGCC CTATGCGCCG
CGCGGCCTGC TGGAGAAGCG CGCATGA
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| Protein sequence | MDADAIVIGA GIVGAACAHA LAQAGRRVLV LDARVGGATG AGMGHLVVMD DNPAELALSS
HSTAQWRALA PRMSEDCAYS ACGTLWIAAN EEEMAEAERK QQRLHEHGIE SRLLGALELA
RAEPALRKGL AGALEVPGDG ILYAPNAARW LLAQGADSIR IEHAKVDAIE DDGTLRLADG
SRRSAPQVVL ANGIEATVLC PELPIRPKKG HLLITDRYPG TVHHQLVELG YVTSAHHSDG
DSVAFNVQPR PTGQLLIGSS RQFDTTDPAV EAPMLARMLQ RAIGYLPGLA EFNAVRSWTG
LRAATPDGLP LLGKHPWREK LWLAVGHEGL GVTTAPGSAH LLAALMTGAA PGFDAAPYAP
RGLLEKRA
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