| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5215 |
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| Symbol | |
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| ID | 7969874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5536153 |
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| End bp | 5537076 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795809 |
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| Product | fatty acid desaturase |
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| Protein accession | YP_002947083 |
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| Protein GI | 239818173 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.345918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTCG CCCCCCGCGC GCAACCCGAG GACTTCTTCT CTGCCGAAGA GTGGCAGTCG
CTCACCAGCC GTTCTTCATG GAAGGGCCTG TGGCTGGTGG TGCACTGCTG GGGCGCCATC
GGCGCCGCGA TGCTCGCGGG CATCGTGTGG CCGTGGACCA TGCCGCTCAT GGTGCCGATC
GTCGGTGCGC GGCAGCTCGG GCTCTTCATC CTCATGCACG ATGCCGCGCA TGCGGGCCTG
CACCGCAGCC GCAAGGTCAA CGACTGGGTG GGCCATTGGC TGTGCTCCTC CACGCTGCGC
GACTACCGGC CCTATCACCT GCAGCACCAC CGCTTCGTGC AGCAGACCGA AGACCCCGAC
CTCGTGCTGT CCGCGCCCTT CCCCATCTCG CGCGATTCGA TGTGGCGCAA GGTCGTGCGC
GATTTGAGCG GCCAGACCTT CTACAAGCAG CGCTTCGGCC ACATTGCCGA GGGCATCCGG
CATCGTGCCC CCGGCGAATC GGCGCTGAAG GCATTCGTGC GCGAACTGGC GAAGGACCGG
CGCTTCCTGG CCGGCAACGG CCTCGGCTTC CTGGCCTTCG CGCTGGCGGG GTACGGATGG
GCCTGGCTCC TGATGTGGCT GCTGCCCATG GCCACCTGGC TGCCGCTCGT GAGCCGCGTG
CGCAACATCG CCGAGCATGC GCTGGTGGCG CAGAACGAGG CCGATCCGCT GCGCCAGGCG
CGCACCACGC ATGCCGGCTG GCTCGAACGC GCGCTGGTGG CGCCCTACTG GGTCAACTAC
CACTGCGAGC ACCACATGTT CACCAGCCTG CCCTGCTGGA GCCTGCCGAA GGCGCACCGG
CTGCTGCAGC GGCGCGGCGC CACCGTGCAC ATGGAAGTGC AGCCCGGCTA CCTGAGCCTG
CTCAGGCGCG CCGCGCCGGC CTGA
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| Protein sequence | MAVAPRAQPE DFFSAEEWQS LTSRSSWKGL WLVVHCWGAI GAAMLAGIVW PWTMPLMVPI
VGARQLGLFI LMHDAAHAGL HRSRKVNDWV GHWLCSSTLR DYRPYHLQHH RFVQQTEDPD
LVLSAPFPIS RDSMWRKVVR DLSGQTFYKQ RFGHIAEGIR HRAPGESALK AFVRELAKDR
RFLAGNGLGF LAFALAGYGW AWLLMWLLPM ATWLPLVSRV RNIAEHALVA QNEADPLRQA
RTTHAGWLER ALVAPYWVNY HCEHHMFTSL PCWSLPKAHR LLQRRGATVH MEVQPGYLSL
LRRAAPA
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