| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5204 |
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| Symbol | |
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| ID | 7969863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5527723 |
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| End bp | 5528652 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795798 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947072 |
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| Protein GI | 239818162 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.647866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTCC GCCGCCTCAA CCCGCCGCTG AACCTGCTGC GCGCCTTTTC CACCGTGGTG
CGCTTCGGCG GCGTCTCGCG CGCCGCCGAG GCGCTGCACC TCACGCAGGG CGCGGTCAGC
AAGCAGGTGC AGGAACTGGA GCGCTGGATC GGCGTGCCGC TGTTCGAGCG CAGCCGCAAG
CGCCTGGCGC TCACGCCCGC GGGCGAGCGC TACGAAAAAG CCGTGCGCGC CCTGCTCGCG
CAGCTGGAGG CGGCCACGCT GGAATTCATC ACCAGCGGCG ACGGCGGCGG CGCGCTGCAC
CTGTCCACCC TGCCCACCTT CGGCGCCAAG TGGCTGATTC CGCGCCTGCC CGACTTCCAG
CGCCTGCATC CGCAGATCAC GCTGCATTTC GTGCCCTTCG TGCATGGCTA CGACTTCGAG
CGCCCCGAGC TCGACTGCGC CATCCTCTTC GGCGACGGCC ATTGGCCCGG CGCGCGCTCG
CACTACCTGG CCGGGCGCGA CGTGGCGCTG ATCGCGCCGC GCGCGGGCCT GGCCGAAGCC
GCCATCCGCA CGCCGCAGGA CGTGGCGCGC TGCACCCTGC TGCGCCACGT CACGGTGCCG
CAGTCGTGGC TGCAATGGAG CGAGGCGCAT GGCGTGCGCG GGCTCGATCC GCTGGCCGGC
CCGCAGTTCG ACCAGTTCCA GACCATGATC CGCGCGGTGA TGGTGGGCAT GGGCGTGGCG
CTGGTGCCGC GCTGCCTGGT GCAGGACGAG ATCGCCTCGG GGCTGGTGGA CGAGCCGCTG
CCGGGCGGCG GCTACCGCGG CGACCAGGGC TACTGGTTCT GCTACCCCGA GGGCCGCGGC
CAGCTGGCCA CGCTCGACCA CTTCCGCCGC TGGCTGCTGG CGGATGCCGA TCGCAGCGCG
GAGGAGCAGG CGCCGCCGGC CCTTGCCTGA
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| Protein sequence | MSLRRLNPPL NLLRAFSTVV RFGGVSRAAE ALHLTQGAVS KQVQELERWI GVPLFERSRK
RLALTPAGER YEKAVRALLA QLEAATLEFI TSGDGGGALH LSTLPTFGAK WLIPRLPDFQ
RLHPQITLHF VPFVHGYDFE RPELDCAILF GDGHWPGARS HYLAGRDVAL IAPRAGLAEA
AIRTPQDVAR CTLLRHVTVP QSWLQWSEAH GVRGLDPLAG PQFDQFQTMI RAVMVGMGVA
LVPRCLVQDE IASGLVDEPL PGGGYRGDQG YWFCYPEGRG QLATLDHFRR WLLADADRSA
EEQAPPALA
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