Gene Vapar_5165 details

Gene Information

• Locus tag: Vapar_5165
• ID: 7969824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 5486067
• End bp: 5486675
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644795759
• Product: Peroxiredoxin
• Protein accession: YP_002947033
• Protein GI: 239818123
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0386] Glutathione peroxidase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.648504
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAATCC CTGCCGCCCT GGCCGCATGC CTTCTTGCCG CTGGCACAGC GGTCGCACAG 
GCCCCCTCTC CCAACTCGTC TCCCAGCCCC ACAGCCGCCC CGGCCGACGG CACCGCCGCT 
GCGGCCTGCC CGTCCACCCT GCAGCACACC TTCCCGCGGC TGCAGGATGA AAAACCCCAA 
TCGCTGTGCC AGTACGCGGG CAAGGTGGTG CTGGTGGTGA ACACCGCGAG CTTCTGCGGC 
TTTACCCCGC AATACAAGGG GCTGGAGGCG CTGGACAGCA AATACCGCGC GCGCGGGCTG 
GTGGTGCTGG GCTTCCCGTC CAACGATTTC GCACAGGAAT CGGGCTCGAA CAAGGAAATT 
GCCGATTTCT GCGAAAGCAC CTTCGGCGTG AAATTTCCGA TGTTCGCGAA GTCGTCGGTG 
CGCGGCGCCA ATGCCAACCC GCTGTTCAAG CAGCTCGCGC TGGCCTCGGG CACCACGCCG 
AAGTGGAATT TCTACAAATA CCTGATCGGA CGCGACGGCA AGGTGGTGCA GGCCTGGTCC 
AGCATGACGG CGCCCGACGA GAGCGCCTTC GTCAAGGTCA TCGAGAGCCA GCTCGCGGCG 
GGCGGCTGA 

 

Protein sequence

MRIPAALAAC LLAAGTAVAQ APSPNSSPSP TAAPADGTAA AACPSTLQHT FPRLQDEKPQ 
SLCQYAGKVV LVVNTASFCG FTPQYKGLEA LDSKYRARGL VVLGFPSNDF AQESGSNKEI 
ADFCESTFGV KFPMFAKSSV RGANANPLFK QLALASGTTP KWNFYKYLIG RDGKVVQAWS 
SMTAPDESAF VKVIESQLAA GG