| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5142 |
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| Symbol | |
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| ID | 7971513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5455959 |
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| End bp | 5456777 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795736 |
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| Product | Hydroxypyruvate isomerase |
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| Protein accession | YP_002947010 |
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| Protein GI | 239818100 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAAT TCGCCGCCAA CCTCTCGATG CTCTATCCGG AGCTCGACTT CCTCGACCGC
TTCGAAGCCG CCGCGAAAGA CGGCTTCAAG GCCGTCGAAT ATCTTTTTCC CTATGCCTTC
GCAAAGGAAG AGCTCGCCGC GCGGCTCCAG CACAACGGCC TGCAGCAGGT GCTCTTCAAC
GCCCCTCCGG GCGACTGGGA CCGCGGCGAG CGCGGCCTGG CCTGCCTGCC GGGCCGCGAC
GCCGAATTCC GCGAAGGCAT GGCCAGCGCC ATCGACTACG CCGTGGCGCT CGGCTGCCCG
CGCATCCACG TCATGGCGGG CCTGGTGCCC GAAGGCCTGG AGCGCGAGGC CGTGCAGCCC
GTGTACGTCG ACAACCTGCG CTGGGCCGCG GCCGAGGCGG CCAAGGCCGG GCGCGACGTG
CTGATCGAGC CCATCAACAC GCGCGACATC CCGCGCTTCT TCCTCAACCG GCAGGACCAT
GCGCACGAGA TCGTCGACAT GGTGGGCGCG ACCAACCTCA AGGTGCAGAT GGACCTGTAC
CACTGCCAGA TCGTCGAGGG TGACGTGGCC ATGAAGATCC GCAAGTACCT GCCCACCGGG
CGCGTGGGCC ACATCCAGAT TGCCGGCGTG CCCGAGCGCC ACGAGCCCGA CATCGGCGAG
CAGAACTACC CCTACCTGTT CGACCTGATC GACGAGGTGT CGGCGCAGTC CGGCTGGCAG
GGCTGGGTCG GCTGCGAGTA CCGGCCCCGG CGCGGCTCGG AACCCGGCGG CACCTCGGCG
GGGCTCGGCT GGCTGCGAGC GCTGCAACAG CGCGCATGA
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| Protein sequence | MPQFAANLSM LYPELDFLDR FEAAAKDGFK AVEYLFPYAF AKEELAARLQ HNGLQQVLFN
APPGDWDRGE RGLACLPGRD AEFREGMASA IDYAVALGCP RIHVMAGLVP EGLEREAVQP
VYVDNLRWAA AEAAKAGRDV LIEPINTRDI PRFFLNRQDH AHEIVDMVGA TNLKVQMDLY
HCQIVEGDVA MKIRKYLPTG RVGHIQIAGV PERHEPDIGE QNYPYLFDLI DEVSAQSGWQ
GWVGCEYRPR RGSEPGGTSA GLGWLRALQQ RA
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