| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5135 |
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| Symbol | |
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| ID | 7971506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5449137 |
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| End bp | 5450501 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795729 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_002947003 |
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| Protein GI | 239818093 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.949399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCCG CCACCGACTG GGAGGCCGTG CGCGCCGATC TGCGCGGGCT CAACCTGATC
ACCGCGCCGG CCCAGCGCAA GCAGCTGTCA AAGGATTTCT ACTGGTACAG CCCCATCCTC
AGCGCGCAGC TCGCGGGCTG CGTGGCCGAC CTCGTCGTCA AGGTCAGCAC CGAGGACGAC
GTGCGCCAGG CCGCGGCCGT GGCCGCCAAG TGGAAGCTGC CGCTCACCGT GCGCGCCGGC
GGCACCGGCA ACTACGGCCA GTGCGTGCCG CTCGAAGGCG GCATCGTGCT CGACGTGACG
CAGATGTGCC GCGTGCTCGA CATTCAGGAC GGCCGCATCC GCGTGGAGGC CGGCGCGCGC
ATGCACGACA TCGACCTTGC GGCGCGCGAA ACCGGCCAGG CGCTGCGCAT GTGGCCTTCG
ACCTGGCACG TGGCCACCAT CGGCGGCTTC ATCGCGGGCG GCTTCGGCGG CATCGGTTCG
TTCCGCCACG GCATCCTGCG CGACCCCGGC AACCTGCTGC GCGCGCGCGT GATGACGGTG
GAGCGCGAGC CGCGCATCAT CGAGCTGCAC GGCGACGAGA TCCAGCAGGT GCACCATGCC
TACGGCACCA ACGGCGTGAT CCTCGACGTG GAAGTGGCGC TGAGTCCGGC CGTCGAGTGG
GTGCACTGCA CGGTGCTGTT CGAGACGTAC CGCGGCGCAC TCGATTTCGG CATTGCCGCG
CAGGCGCCGA CGCTCGACAT CTTTTTGCTC TCGACCGTCG AGGCCCGCTT CTCACCCTAC
TACACGGCGA TGCGCGACCG CTTTCCGCGC GACCGGCATG CCGCGTTCGC GATGGTCTCG
CCCGACTCGA TGGCCGGGTT CCGCGCGCTG GCCGCCGCGC ATGGCGGCAC CCTCTCCGTC
GCCGGTACCG AGCCCGAACT GCTTGCCGAG GGCCTTCCGC CCGCGTACGA ATGCGCGTTC
AACCACACGA CGCTGCAGGC GCTCAAGGCC GACCGCGGCT GGACCTACCT GCAGGTGGCC
TACGCCCAAC CCTTCGACCC GGCGGTGGTC GAGCGCCATC TGCAAATCTT CGGCGACGAG
GTGCTGCAGC ACCAGGATTT CGCGCGCGCC GGCGGCGAAT GCGGCACCTT CGGCATCCTG
CTGGTGCGCT GGAAGGGCGA AGCCCACCAG TACGAGGTGA TCCGCGAGAT CGAGTCGCAG
GGCGGCTGCA AGATCTTCAA TCCGCATGTC GTGACCATCG AGGACGGCGG CATGAAGACC
ATCGACACGC AGCAGATCGA GTTCAAGAAG CGCAGCGATC CGATGGGGCT CATGAACCCC
GGCAAGACGC GTGGCTGGAC TTCCGAGATG GCTGTCGAGC GTTGA
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| Protein sequence | MHAATDWEAV RADLRGLNLI TAPAQRKQLS KDFYWYSPIL SAQLAGCVAD LVVKVSTEDD
VRQAAAVAAK WKLPLTVRAG GTGNYGQCVP LEGGIVLDVT QMCRVLDIQD GRIRVEAGAR
MHDIDLAARE TGQALRMWPS TWHVATIGGF IAGGFGGIGS FRHGILRDPG NLLRARVMTV
EREPRIIELH GDEIQQVHHA YGTNGVILDV EVALSPAVEW VHCTVLFETY RGALDFGIAA
QAPTLDIFLL STVEARFSPY YTAMRDRFPR DRHAAFAMVS PDSMAGFRAL AAAHGGTLSV
AGTEPELLAE GLPPAYECAF NHTTLQALKA DRGWTYLQVA YAQPFDPAVV ERHLQIFGDE
VLQHQDFARA GGECGTFGIL LVRWKGEAHQ YEVIREIESQ GGCKIFNPHV VTIEDGGMKT
IDTQQIEFKK RSDPMGLMNP GKTRGWTSEM AVER
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