| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5105 |
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| Symbol | |
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| ID | 7971476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5417504 |
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| End bp | 5419156 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795699 |
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| Product | monooxygenase FAD-binding |
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| Protein accession | YP_002946973 |
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| Protein GI | 239818063 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.147927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCT TTGCATTTGC ACCGGCCTAC GAGCTGCCGG TCTGGCCGTT CACGCCACCG
CCCGAACTGG GCCGTACGGA GATCGTCCGC CACCCGATCG TGATCGTCGG CGCCGGCCCC
TCGGGCCTCA CGCTGGCCTG CGACCTCGCG CAGCGCGGCG TGCGCGCGGT GCTGCTCGAC
GAGGACGACA CCGTCGGCGT GCGCGGCGCG TCCTCGCGCG GCATCTGCTA TGCGCAGAAG
AGCCTCGAGA TCTTCGAGCG CCTGGGCATC TGCGAGCGCA TCGCGGCCAA GGGCATCACC
TGGTCGCTCG GGCGCACCTT CTCGGGCGAG CAGGAGGTCT ACAGCTTCAA CCTGCAGGCG
GAGAGCGTCT CGAGGCAGCC ACCCTTCATC AACCTGCAGC AGTTCTACAT CGAGTGGTTC
CTGGTCGAGC GCATCCTCGA ACTCGGCCTC ACCGACGTGC GCTGGAAGAG CCGCGTGACG
CGCATCGAGC CCCTGAGCGA TGGCGTGCGC ATCGACATTG AAACGCCCGC CGGCCGCTAC
ACGATCGAAG CCGACCGCCT GATCGATGCG ACCGGCGCCA ACAGCCCGAT CCGCACGCAG
CTCGGCATCG ACGCGCATGC CTCGCGCAGC ACCGACCGCT GGTGCATCAG CGACGTGCGC
TTCAGGAAGC CGCTGCCCAC CGAGCGCTGG ACCTGGGTCG ACGCGCCCTT CAACGAGGGC
CGCGGCGTCT GGCAGCACCT GATGGCCGAT GGCGTGTGGC GCATCGACTA CCAGATGCCC
GAGGACTGCG ACACCGCCCA CATCAGCCGG CCCGAAGTGG CGGGCGCGCG GCTGCGCGAG
CAGCTCGGGC CGGGCGTGGA GTTCGAGTTC GTCTGGATCG GCCCGTACGG CTACCGCGAC
CACCTGCTCG ACAGTTTCCG CCACGGCCGC GTGTTCTTCA TCGGCGATGC CGCGCACGTG
GTGAGCCCCT TCGGCGCGCG CGGCGGCAAC AGCGGCATCC AGGATGCGGC CAACCTCGGC
TGGAAGCTGG CGCTGGTCGT GCAAGGCCAA GCGAACGATG AACTGCTCGA CAGCTACGAC
GCCGAACGCC AGCGGGCCGC GAAGGAGAAC CTGAAGGTCA CGAGCCGCTC GGCGCGCTTT
CTTGCGCCGC GCTCGCCGGC CGAGCACACG CTGCGCCGCG CGGTGGTGGC GCTGGCCGCG
CGCCATCCGT TCGCGCGTGC GCTGGTCAAC ACCGGCCGCA TGTCGGTCGC CAACGACTAT
CCGCCCGCGC CGCAGCTGCC GGAAGGCGCA CGCACGGTGC AGAACCTGCC GCTGCGCTGG
GCCGATGGCC GCGAGACCAC GCTGATGCAG CTGCTGGCCG AGGGCACGCA GTGCCTGGGC
CTGTGGCTGG CACCCACACG CGCCGCGGCC GCCGCGGCGA TGGATGCCAC GGCGGCGCTG
CCGCTGCGCC TGCTCGCGAT CGGCGGCGAC AGCGGGCTGC CGGCGCTGCG GGCCGACGAG
ACGCTCGTGC GCCACCTCGG CCTGCGCGAC GCGGGCAGCT TCGTGCTCGT GCGGCCCGAT
GCCTACCGCG CCGCGACGCT GCCGCAGGCC ACGCCCGATG CCATCGCCAC CGCACTGCGC
ACCGCGCTCG CCCTCGACCA CCACGCCCCA TGA
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| Protein sequence | MESFAFAPAY ELPVWPFTPP PELGRTEIVR HPIVIVGAGP SGLTLACDLA QRGVRAVLLD
EDDTVGVRGA SSRGICYAQK SLEIFERLGI CERIAAKGIT WSLGRTFSGE QEVYSFNLQA
ESVSRQPPFI NLQQFYIEWF LVERILELGL TDVRWKSRVT RIEPLSDGVR IDIETPAGRY
TIEADRLIDA TGANSPIRTQ LGIDAHASRS TDRWCISDVR FRKPLPTERW TWVDAPFNEG
RGVWQHLMAD GVWRIDYQMP EDCDTAHISR PEVAGARLRE QLGPGVEFEF VWIGPYGYRD
HLLDSFRHGR VFFIGDAAHV VSPFGARGGN SGIQDAANLG WKLALVVQGQ ANDELLDSYD
AERQRAAKEN LKVTSRSARF LAPRSPAEHT LRRAVVALAA RHPFARALVN TGRMSVANDY
PPAPQLPEGA RTVQNLPLRW ADGRETTLMQ LLAEGTQCLG LWLAPTRAAA AAAMDATAAL
PLRLLAIGGD SGLPALRADE TLVRHLGLRD AGSFVLVRPD AYRAATLPQA TPDAIATALR
TALALDHHAP
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