| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5104 |
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| Symbol | |
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| ID | 7971475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5416375 |
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| End bp | 5417496 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795698 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946972 |
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| Protein GI | 239818062 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.293551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGC TGCAACTCGC CGTCATCGAC GTGAAGCCCG GCGCGGCCAT GGAGAGCCAG
TCGGGCCTGC AGATGCTGCG CCCGCGCATC TACGGCGCCT TCCGCGCGCC GCCGGGTCCG
AAAAGAATCG CGGCCATCGT GATGCATCCG ACCAGCAACT TCATGGGCCA CTACCTGATC
GGCCCGCTGG CCGAGCGCGG CATCTGCTGC ATGGGGCTGA ACTCGCGCTA CGCGGGCAAC
GACACGGTGC TGCTGATGGA GCGCGCGATC CAGGACCTGG GCGCCGGCGT GCAGTACCTG
CGCGCGGCCG GCTACGAGAA GGTGTTCCTG GTCGGCAACT CCGGCGGCGC TGCGCTCTCG
GCCTTCTACC AGGCGCAGGC CGAGAAGCTC ACCGCCACCC ACCTGCCCGA CGGCGACCCC
ACGCACCTGC ACCCCGCCGA CCTGCCGCCC GTGGACGGCG TCGCGCTGTG CGCCGCGCAC
CTGGGCCGCA CGCGGCTGAT GCGCGACTGG ATCGACCCCT CGGTCACCGA CGAGCACGAC
CCGCTCTCGG TGGACCCCGA GCTCGACATG TACGACCCGC GCCACCGCAT GCCCTACGAC
CGCGGCTTTC TCGCGCGCTT CAGCGCGGCG CAGCAGGCGC GGCTCGGTCG CATCGAGCAG
TGGTGCGTCG ACCGCCTCGC GCTGCTGCGC AGCACCCCGG GCGCACCGCG CGACCAGACC
TTCATCGTCT ACCGCACGCA TGCCGATCCG CGCTGCGTGG ATCTTTCACT CGATGCCAAC
GACCGCCTGC CGGGCAGCGT GTGGGGCGAT GCGCGCCAGG TCAACTACTC GGCCAATGCG
ATGGGCCGCA CCACTTCGCT CACGGCCTTC CTCTCGCAAT GGTCTTCGCG CTCGCAGGCC
GACGGGCCAA CGAATCTCGC GCGCACCGCG GTGCCGAAGC TGCTGCTGAC CTACACCGGC
GACCAGTCGA CCTTCCCGAG CACGCGCGAT GCGTGGATGG CCGCGGGCGG CGCGCGCATC
CGCAATGTCG ACATCGTGGG CGGCAACCAC TACCTCGCGG GCCAGCCCGA GCTGATCCCG
AAGGCGGCCG ATGCCATCGC CGAATTCGCC CACGCGCTGT AG
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| Protein sequence | MPELQLAVID VKPGAAMESQ SGLQMLRPRI YGAFRAPPGP KRIAAIVMHP TSNFMGHYLI
GPLAERGICC MGLNSRYAGN DTVLLMERAI QDLGAGVQYL RAAGYEKVFL VGNSGGAALS
AFYQAQAEKL TATHLPDGDP THLHPADLPP VDGVALCAAH LGRTRLMRDW IDPSVTDEHD
PLSVDPELDM YDPRHRMPYD RGFLARFSAA QQARLGRIEQ WCVDRLALLR STPGAPRDQT
FIVYRTHADP RCVDLSLDAN DRLPGSVWGD ARQVNYSANA MGRTTSLTAF LSQWSSRSQA
DGPTNLARTA VPKLLLTYTG DQSTFPSTRD AWMAAGGARI RNVDIVGGNH YLAGQPELIP
KAADAIAEFA HAL
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