| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5086 |
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| Symbol | |
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| ID | 7971457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5398150 |
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| End bp | 5399166 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795680 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002946954 |
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| Protein GI | 239818044 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCC CGCCCCGTTT TTCGCCCCGC ACGATCGGCA TCGGCGCGGC CGTGGTCACC
GTGCTGGTGT GGACCGCCTT CATCGTGATC GCCCGGGCCT CGGCCGCACG CTCGCTCACC
CCGCTCGACC TGGCGCTGGC GCGCATCTGC GGTGCCAGCC TGGTGCTGGT GCCCTGGGGT
GCCTGGATGG TCATGAAGGG CCAGCGGCAG AAGGACGGCA GCGCTTCGTC GCTGTTCGGG
CTGTCGCCGC TGTCGCTGCG CCTCACGGCC GGCGCCGGCA TTTTCGGCGG CGTGGCCTAT
GCCCTGCTGG CCTACAGCGG CTTCTTCTTC GCGCCCGCGG GCCATGCCTC GGTGCTGATG
CCCGGCAGCC TGCCGCTGTG GACCACGCTG CTGGCCGCGC TGGTGCTGCG CGACCGCATC
ACGCCGGGCC GCGCCTTCGG CCTCGCGCTG ATCGTGGCCG GCGACCTGGT GGTCGGCGGG
CGCAGCCTGC TGCATGCCTT CGAGGGCGGC GAGGTCTGGA AGGGCGACCT GCTCTTCATG
GCCGCGGCCT TCTGCTGGGC CTGCTACAGC GTGGTGGCGC GCCGCCACGG GCTGGACGCC
GTGCGCGCGA CCATCGCCAT CACCGTGTTC GCGCTGCTGG CCTACGTTCC GGTCTACGGC
CTGCTGGTGG CGGGCGGCGC GGTCGTGAGC CGCATCGGCG CCGCACCCTG GGGCGAGGTG
GCGTTCCAGA TGCTGTTCCA GGGCGTCGGC TCGGTCGTCG TCTCGGGCAT CACCTTCACG
AAGATGATTC AATATTTCGG CCCGGTTCGC AGCACCATGA TCACGGCCCT GGTGCCTGGC
CTCTCGGCCT TCGGCGCGGT GATCTGGCTC GACGAGCCGC TGTACTGGAA CCTGATCGCC
GGCCTGCTGC TGGTGACGGC CGGCATTTTG TTCGGCGTGC AGAAAACATC GGCCGGTGGG
CGCGCGGCTG CGCGGCCCGC AATGCCGGCC ACCGCCACGG GGTGCCGCGA TGCCTAG
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| Protein sequence | MPAPPRFSPR TIGIGAAVVT VLVWTAFIVI ARASAARSLT PLDLALARIC GASLVLVPWG
AWMVMKGQRQ KDGSASSLFG LSPLSLRLTA GAGIFGGVAY ALLAYSGFFF APAGHASVLM
PGSLPLWTTL LAALVLRDRI TPGRAFGLAL IVAGDLVVGG RSLLHAFEGG EVWKGDLLFM
AAAFCWACYS VVARRHGLDA VRATIAITVF ALLAYVPVYG LLVAGGAVVS RIGAAPWGEV
AFQMLFQGVG SVVVSGITFT KMIQYFGPVR STMITALVPG LSAFGAVIWL DEPLYWNLIA
GLLLVTAGIL FGVQKTSAGG RAAARPAMPA TATGCRDA
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