| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5078 |
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| Symbol | |
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| ID | 7974197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5390855 |
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| End bp | 5391361 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795672 |
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| Product | YiaAB two helix domain protein |
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| Protein accession | YP_002946946 |
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| Protein GI | 239818036 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4298] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCT TCCCTTCCAC CACCGTTTCG ATCCAGCGCG ACACGCGGGC CTGGCAGTTC
CAGGTCTGGG CTTCGTTCGC GGCCGCCGTG TTCCTGTGCG CCACCGGCCT GAGCTGGCTG
CCGGGCGAGG CGCTGGACCG TGCGTTCATG GTGATGGGCT ATGTGTTCTG CCTGAGCACC
GCCTTCATGC TGGCCAAGTT CGTGCGCGAC AGCCAGCAGG CAGGCGCCGG CGGCACGGCA
GCGAGCCGCG ACGTGCCGAT GTGGCGCCTG GTGGTCTGGG GCAGCTTCTT CACCGCGATG
GGCCTGACCG GCTGGGGCCT GGTCCGCATG GAGATCAACG ACGCCTACAA GGCCTTCCTC
GGTGTGAGCT GGCTGTTCCT GATCAGCTCG GCCTTCACGC TGGCCAAGAC GCTGCGCGAC
CGCCACGAAG CCGACCTGAT CGAGGCGCGC CTGCAGGGCC GCCGCGCCGC CCGCCAGGAA
GCCGCTGCCG CCGGCTCGGC CGAATGA
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| Protein sequence | MQTFPSTTVS IQRDTRAWQF QVWASFAAAV FLCATGLSWL PGEALDRAFM VMGYVFCLST
AFMLAKFVRD SQQAGAGGTA ASRDVPMWRL VVWGSFFTAM GLTGWGLVRM EINDAYKAFL
GVSWLFLISS AFTLAKTLRD RHEADLIEAR LQGRRAARQE AAAAGSAE
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