| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5075 |
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| Symbol | |
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| ID | 7974194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5388472 |
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| End bp | 5389530 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795669 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946943 |
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| Protein GI | 239818033 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGT CACTGCGTCT GTCCGAAAAA TGGTTTCGCC GCGGGCTCTG GCTCGTGGCG
CTGGCGTTCG CGAGCTTTTT GATCGGGCTC GGCGGCGCCG TCGTGGACGA CCTGCCGCGG
GTCGAGCGGG CGCTCGAGCT CGACGACTTC ATCGACCGCC CCGCGGCCGA GCCGCTGCGC
AGCACCATCA AGGCGTCGGA GGCGGCCGAG CTGCAGGCGA CGCGGCAGCT GGAGCAGGTC
CGCCTGCAGC AGAGCGCCGC GCGGCAGGCC AGCGCCAACG CGCGCGAGAC CTTCGGCAAC
TGGATCGCCA CGCGGCGCGC CACCGCGCAG CCCGACCAGG ACACGGAGCT GATCGCACGC
ACCAAGCAGC TCGATGCCTT CAAGCAGAAG GAGGACGAGG TCCAGCGCCT GGTGAATGCG
CAGCAGCAGG CCGTGCTCGA CGCGCGCCAG GCCGAGCAGC GCGCCCGGGA GGCGCTGTTG
CTGCTGGAGC GCGATGCGCG TGAAAAGCTC AACGCCGAGT ACCGCCGCGT CGAACTGCGC
GTGTTCGCCT ACCGCCTGGC GCTCACGCTG CCGCTGCTGG TCGTGGCCGG CTGGCTGTTC
GCAAAGAAGC GCAAGAGCAC CTACTGGCCC TTTGTCTGGG GCTTCATCTT CTTTGCGCTG
TTCGCCTTCT TCGTCGAACT GGTGCCGTAC CTGCCAAGCT ACGGCGGCTA CGTGCGCTAC
GTGGTGGGCA TTGTGGTCAC GGTGCTCGTG GGGCGCTATG CGATCGTGGC GCTCAACGCC
TACCTCGCGC GCCAGAAGCT CGCCGAGCAG CAGCCCGACC AGGTGCGCCG CGAGGAGCTC
AGCTACGACG TCGCGCTCGC GCGGCTCGGC AAGGGCGTGT GCCCCGGCTG CGAGCGCCCG
GTGGACCTGA AGAACGGCGA GATCGACTTC TGCCCGCACT GCGGCATCGG CCTGTTCGAC
CACTGCGGGC AGTGCGAAAC GCGCAAGAGC GCGTTCTCGA AGTTCTGCCA TGCCTGCGGC
ACCTCCGCGG CCGCAACGCA GGCGCCGCAC ACACTGTGA
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| Protein sequence | MSKSLRLSEK WFRRGLWLVA LAFASFLIGL GGAVVDDLPR VERALELDDF IDRPAAEPLR
STIKASEAAE LQATRQLEQV RLQQSAARQA SANARETFGN WIATRRATAQ PDQDTELIAR
TKQLDAFKQK EDEVQRLVNA QQQAVLDARQ AEQRAREALL LLERDAREKL NAEYRRVELR
VFAYRLALTL PLLVVAGWLF AKKRKSTYWP FVWGFIFFAL FAFFVELVPY LPSYGGYVRY
VVGIVVTVLV GRYAIVALNA YLARQKLAEQ QPDQVRREEL SYDVALARLG KGVCPGCERP
VDLKNGEIDF CPHCGIGLFD HCGQCETRKS AFSKFCHACG TSAAATQAPH TL
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