| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5028 |
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| Symbol | |
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| ID | 7974146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5346654 |
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| End bp | 5349203 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795621 |
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| Product | flavodoxin/nitric oxide synthase |
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| Protein accession | YP_002946896 |
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| Protein GI | 239817986 |
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| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
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| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
[COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCTCC TGAGACAGAT CTGGTTCCAG ATCCACTGGT TCATCGGCAT CACGGTCGGA
AGCGTGCTCG TCGTGATCGG GCTGAGCGGC GCGGTGCTCT CCTTTCGCGC GGAGATCGTC
GACGCGCTCA ATCCCACGCT GCGCCACATT CCCAACCCCG CCGGTGCACT GGCACTACGG
CCCGCGGCGC TCGCGGCGCA GGTGCAAGCG GCACAGCCGG CACAGCGCAT CGCCGCGCTC
ACGGTGTTCG CCGAACCCGG CCGGCCGGCG CGCGTCAACT TCGCGCCGCC CGAAGGCCAG
CGCCAGGGCG AGGTCCGGCT GATCGATCCC TGGACCGGCG CGCTGCTGCC CGTGCCCACG
GGCGAGGCCT TCTTCGAGTT CGCCGAGCAC CTGCATCGCT GGCTGCTGCT GCCCCGCGAT
GCGGGCAAGC CCGTCACCGG CACCCTGGCC GCGGGGCTGC TGATCCTTGC GCTGTCGGGC
CTCTACCTGC GCTGGCCGCT CGCGTGGCGG GCCTGGTTGA AGCTGGACTT CGCGCTGACC
GGCCGCGCCT TTCTCTGGAA CCTGCATGCG GTGGCCGGCA CCCTTGCGCT GCTGGTGTAC
CTGGTCTCGA GCCTCACGGG CATCTACTGG GGCTTCGACG CCGTGCGCGC GATGGTCGAC
AACGCTGCCG GCGAAGGGCG CGTGGTCCGT GCGCAGGGCA TGCAGGCCGG CGGCGCGCCC
GCCAAGGCGC AGGCGGCGCC CGACCTGCAG CGCGTGTGGC AGTCCTTCCT CGATGAAACC
GGCGGCGACT GGAGCCTGGC CACGCTGCGC CCGCCGGCGC GCAATGCATC GCAGATGGAA
GTGACCTACC TGCGCGCCCA TCCCGAACAC GAACGCGCAC GCAACCGCCT CTATCTCGAC
GCCGCCACCG GCGAGCCCTC CCGGCACCAG CGCTACGCCG ACAAGCCGCT GGCCGGCCGC
CTGGTCAACA GCATCTATCC GATGCACATG GGCACCTACT GGGGACTGCC GGGCCGCATC
GTGATGCTGC TCGGCAGCCT GGGCCTGGCG CTGTTCGCGG TCACGGGGTG GATGCTCTAC
CTCGGACGCC GGCGCACCAA GCGGGCCGTG CGCGAAGAGC GCACGCGGCT CGGTCCTGCG
CTGCGGCCGG ACGGGCCCGG CGCCGAGCCC GTGCTGCTCG CCTTCGCAAG CCAGACCGGC
CAGGCGGAGC GCATCGCGCT GCAGACGGCC GCGGTGCTGC AGTCGGCCGG TGTCGCGGTG
GTGCTGCAGC CGCTGGTGCG CCTGAGCGTG GATGCGCTGC GGCGCTACCG CAAGGTGCTG
CTGGTGGCCA GCACCTTCGG CGATGGAGAT CCGCCGGACA GCCTGCGCGC CTTTGCGCGC
CAGTTCGCGC TGCAGACCGG CTCCGGCCTG CAGCATGTGC ACTACGGCCT GCTCGCGCTC
GGGGACCGGC ACTACGCCAA CTTCTGCGGC TTCGGCCGAT CGCTCGACCG CGACCTGCGC
GGCCATGGCG CAGAGGCGCT GTTCCCGATG ATCGAAGTGC ACAACGGCGA TGCCGGTGCG
CTGGCGCGCT GGCAGCACGC GTTGGCCGAA GCCTTCGGCG TGCTGCAGCC CGGCGCATGG
AAGTCGCACG AAGCGGAGGT GGCACCCTTC GAGCCCTGGC GCGTCGTGCG GCGCACCCTG
CTCAATGCCG GCAGCCAGGG CGATCCGCTC TTCGAGATCG AGCTTGCGCA TGCGGGCGCG
GCCGACTGGG CGCCGGGCGC GCTCGTCGAA CTGCGGCCGC GCCAGTCCGG CCACGCGGTC
GAGCAATTCC TGCGCCGCGC CGGCCTCGAC GGGCGAACGC GCGTGCGCTG CGATGGCCGC
GCGTGCACGC TCCAAGATGC GCTGTCCCGC AGCATGCTTC CGGCCGCACC GGCGGCCAGC
GCGCAGGCAC TGGCCGACAC GCTGGTGCCG CTCGCGCCGC GGCGCTATTC GGTGGCCTCG
ACCACCGCCG ATGGCTGCGT GCAGCTGCTG GTGCGCCAGG CGCGCCACGC GGACGGCATG
GGCGTGGCCT CGGGCTGGCT GACCGACGGG GCGCCGCTGG ATGCGCGGGT CGAGTTGCGC
CTGCTGCCCA ATCCCGCGTT CGCACTCGTC GACGACGAGG CACCCTGCGT CTTCATCGGC
AACGGCTCCG GCCTTGCCGG CCTGCGCGCG CATCTTCGCG AGCGCGTGCG CCGAGGCCAC
GGGCGCAACT GGCTGGTGTT CGGCGAGCGG AATGCCGCGC ACGACGCCTT CTGCGCCGAG
CAGATCGCGC AGTGGCAGGC GGCCGCGGCG CTCGAGCGCG TCGACCTCGT GTTCTCGCGC
GACCAGGCCG AGCGCCTGTA TGTGCAGCAC CGGCTGCGCG AGGCGGCCGG CCTGCTGCGC
CAATGGGTGG CCGAGGGTGC GATGGTCTAC GTCTGCGGCA GCCTCGAAGG CATGGCGCCG
GGCGTCGATC TCGCATTGCG CGAGGTGCTG GGCGCGCCGG CCTATGACGC GCTGGTGGCA
GAGGGCCGTT ACCGGCGCGA CGTCTATTGA
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| Protein sequence | MALLRQIWFQ IHWFIGITVG SVLVVIGLSG AVLSFRAEIV DALNPTLRHI PNPAGALALR
PAALAAQVQA AQPAQRIAAL TVFAEPGRPA RVNFAPPEGQ RQGEVRLIDP WTGALLPVPT
GEAFFEFAEH LHRWLLLPRD AGKPVTGTLA AGLLILALSG LYLRWPLAWR AWLKLDFALT
GRAFLWNLHA VAGTLALLVY LVSSLTGIYW GFDAVRAMVD NAAGEGRVVR AQGMQAGGAP
AKAQAAPDLQ RVWQSFLDET GGDWSLATLR PPARNASQME VTYLRAHPEH ERARNRLYLD
AATGEPSRHQ RYADKPLAGR LVNSIYPMHM GTYWGLPGRI VMLLGSLGLA LFAVTGWMLY
LGRRRTKRAV REERTRLGPA LRPDGPGAEP VLLAFASQTG QAERIALQTA AVLQSAGVAV
VLQPLVRLSV DALRRYRKVL LVASTFGDGD PPDSLRAFAR QFALQTGSGL QHVHYGLLAL
GDRHYANFCG FGRSLDRDLR GHGAEALFPM IEVHNGDAGA LARWQHALAE AFGVLQPGAW
KSHEAEVAPF EPWRVVRRTL LNAGSQGDPL FEIELAHAGA ADWAPGALVE LRPRQSGHAV
EQFLRRAGLD GRTRVRCDGR ACTLQDALSR SMLPAAPAAS AQALADTLVP LAPRRYSVAS
TTADGCVQLL VRQARHADGM GVASGWLTDG APLDARVELR LLPNPAFALV DDEAPCVFIG
NGSGLAGLRA HLRERVRRGH GRNWLVFGER NAAHDAFCAE QIAQWQAAAA LERVDLVFSR
DQAERLYVQH RLREAAGLLR QWVAEGAMVY VCGSLEGMAP GVDLALREVL GAPAYDALVA
EGRYRRDVY
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