| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5026 |
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| Symbol | |
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| ID | 7974144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5344843 |
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| End bp | 5345754 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795619 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002946894 |
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| Protein GI | 239817984 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGACAC GACGCTTTCT TGCAGCCGCG GCCGCCGCGG CACTGCTGCT GTCCGCCGCA
AGCGCCAGTG CGCAAACCGA CACCTTGAAG AAGATCAGGG AGTCCGGCGC CATCACCATG
GGCGTGCGCG ACGCCTCGGG CGCCATGTCC TTCACGCTCG GGCCGGGCAG CTACACGGGC
TTTCACGTCG AAGTCTGCGA GCGTGTCGTC GCCGACATCG GCCGGGCGCT GCAGATCGAG
AAGATCCACG TGAAGTACCA GCTGGTCACG CCGCAGAATC GCATTGCCCT GGTGCAGAAC
GGCACCGTCG ACATCGAGTG CGGCACCACG ACCAACAATG CGGCGCGCCA GAAAGACGTG
GCATTCGCGC CCACGCTCTA CGTCGAAGGG GTCCGCATCG CCGTGAAGGC GGCCTCCGGC
ATCGTGTCGC CCGCGCAGCT CTCGGGCAAG GCGGTGGCCG CGACGACGGG CACCACGTCC
GTCCAGCTCC TCAGGAAGCT CAAGCGCGAG GGTGCGGGCG AGATCGCGGA GGTGCTCGCC
AAGGACAACA GCGAAGGCTT CCTGCTGCTC GAATCGGGCC GGGTGGATGG CTTTGCGGCC
GACGGCCAGA TCCTTGCCAC GCTGATCTCC AAGAGCAGGG AGCCGGCGCA GTACAAGCTG
CTCGACCAGG TTCTCAGTGT CGAGCCGATC GCGATCATGC TTGCGAAGGG CGACCCCGCG
TTCAAGAAGC TCGTCGACCA GAGCGTGGTG TCGCTGGCCA GGAGCGGAGA AGCCGCGCGG
CTCTACGACA AGTGGTTCAT GCAGCCCATT CCTCCGCACA ACTCGAAGGT CGGGCTGCCG
GCCAGCGCCT TGACGAAGGC CGCCTGGGCC AGTCCCAGCG ACAAGCCGAT GGAGGCATAC
GAGGCGCGAT GA
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| Protein sequence | MKTRRFLAAA AAAALLLSAA SASAQTDTLK KIRESGAITM GVRDASGAMS FTLGPGSYTG
FHVEVCERVV ADIGRALQIE KIHVKYQLVT PQNRIALVQN GTVDIECGTT TNNAARQKDV
AFAPTLYVEG VRIAVKAASG IVSPAQLSGK AVAATTGTTS VQLLRKLKRE GAGEIAEVLA
KDNSEGFLLL ESGRVDGFAA DGQILATLIS KSREPAQYKL LDQVLSVEPI AIMLAKGDPA
FKKLVDQSVV SLARSGEAAR LYDKWFMQPI PPHNSKVGLP ASALTKAAWA SPSDKPMEAY
EAR
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