| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5022 |
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| Symbol | |
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| ID | 7974140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5340698 |
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| End bp | 5341474 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795615 |
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| Product | ABC transporter related |
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| Protein accession | YP_002946890 |
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| Protein GI | 239817980 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGG TCGACACCTC GCAGCCCCTG GTCGAGCTGA AGGAGATCCG CAAGGCCTTC
GGCGGCGTGA AGGCCGTGGA CGGCGTGAGC ATCAACCTGC ATCCCGGCGA AGTGGTGGCG
GTGCTCGGCC ACAACGGTGC GGGCAAGTCC ACGCTCATGA AGATGCTCGC GGGCGCCTAC
CCGGTCGATT CGGGCGACAC GCTGATCGCG GGCGAGAAGG TCCACATCCG CACGCCCGCC
GAGGCGCAGG CGCTCGGCAT CGAGACCATC TACCAGACCC TCGCGCTGGC CGACAACCTC
GACTCCGTAT CGAACCTCTT TCTCGGCCGC GAGAAGATGA CGCGCTGGAA CACGCTCGAC
GACCACTTCA TGGAAGTGCA GGCGCGCAAG GTGTTCCAGC GCCTGAACAA GAACTTCACC
AACATCCGCA TTCCGGTGCG CCGCCTCTCG GGCGGGCAGC GGCAGGTGGT GGCGATCTCG
CGCGCGCTGT ACTTCAACGC GCGCATCCTG ATCATGGACG AGCCCTGCGC CGCGCTCGGG
CCCGAGGAAA CCGCGATGGT CGGCGGGCTC GTGAAGCAGC TCAAGGCCGA CGGCGTCGGC
ATCTTCCTGA TCACGCACGA CATGCCCGAC GTGTTCTCGC TGAGCGACCG CGTCGCGGTC
ATGAAGAACG GCAGGCTCGT GGGCACCTAC CGCACCGCGG ACGTCACCGA AGACGAAGTG
CTCGGCATGA TCATCGCCGG CAAGCGCCCC GAAGGAAAAG AGCAGGCCCA CAGGTGA
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| Protein sequence | MTTVDTSQPL VELKEIRKAF GGVKAVDGVS INLHPGEVVA VLGHNGAGKS TLMKMLAGAY
PVDSGDTLIA GEKVHIRTPA EAQALGIETI YQTLALADNL DSVSNLFLGR EKMTRWNTLD
DHFMEVQARK VFQRLNKNFT NIRIPVRRLS GGQRQVVAIS RALYFNARIL IMDEPCAALG
PEETAMVGGL VKQLKADGVG IFLITHDMPD VFSLSDRVAV MKNGRLVGTY RTADVTEDEV
LGMIIAGKRP EGKEQAHR
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