| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4974 |
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| Symbol | |
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| ID | 7974256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5286177 |
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| End bp | 5287082 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795569 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946844 |
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| Protein GI | 239817934 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.19467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGAACTCA AGCAATGGCG ATGCTTCGTC ACGCTGGCCG AGATCGGCAA CATCCGGCGC
GCCGCCTCGC TGCTCGCCAT CTCGCAGCCC GCGCTCAGCG TGCGGGTGCA GCGGCTCGAG
GAGGCCCTGG GCTTTGCGCT GTTCGACCGG CAGGCGCGCG GCGTCCGGCT GACGGAGCAG
GGCGCGCGCC TGCTGCCGCA CGCCCGGCGG CTGCTGTCGC GCGCCGCCGA AACCGACGAG
GCCGCGCGCG CCATCGGGCG CGGCGCCTTC GACCGGCTGG AGATCGGCGT CACGCCCATC
GCAGCGCTGT CCTTCTTTCC CGATGCGATG CGCGCCTTTT CGGCCGCGCA TCCGGGCGTG
GTGCTGGCGC TGACCGAGGG CCTCTCGGAC GAACTCGAGG AGGCCGTGGC GCACCGCAGG
CTCGACCTCG CGGTGGTGCA TCCGCCGTCC TCGCGCGACG ACCTCGTGGT GCGCGAGGTG
GCCCGCGACC GCTTCATGGC CGTGGTGCCG GCCGCACATC CGCTCGCGGG CGCCGGGCGC
ATCGCGGCGG CCGACCTGCG CCAGCAGACG CTGGTCGGGG TGCGGCGCGA CATCGGGCCG
GTGGTGTTCG ATCGCATCGC CGCCTACCTT GCGCGTGCCG GCATCACCAC GCAGGTCAAC
CAGTGCGCAA GCTCGTCGAT CTCGCTCGTG GGGCTGGTGG CGGCCGGTGC GGGCATCGGG
CTGGTGGTGG AGTCGCTCGC CTGCATCGCA CGGCCCGACA TCCGTTTTGT TGCACTTGCC
GACGATCCGC CGAGCCTGGG CTATGCGATG TGCCACCGGC CCGACCTGCC GGCGGAACTG
CAGGGCGCGT TCATGCAGGC CTTCCATGCG CCCAAGGCGG GCGCCGGCGC GCGGCCCGTG
CTATGA
|
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| Protein sequence | MELKQWRCFV TLAEIGNIRR AASLLAISQP ALSVRVQRLE EALGFALFDR QARGVRLTEQ
GARLLPHARR LLSRAAETDE AARAIGRGAF DRLEIGVTPI AALSFFPDAM RAFSAAHPGV
VLALTEGLSD ELEEAVAHRR LDLAVVHPPS SRDDLVVREV ARDRFMAVVP AAHPLAGAGR
IAAADLRQQT LVGVRRDIGP VVFDRIAAYL ARAGITTQVN QCASSSISLV GLVAAGAGIG
LVVESLACIA RPDIRFVALA DDPPSLGYAM CHRPDLPAEL QGAFMQAFHA PKAGAGARPV
L
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