Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4962 |
Symbol | |
ID | 7974244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5273930 |
End bp | 5274589 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644795557 |
Product | Glutathione S-transferase domain protein |
Protein accession | YP_002946832 |
Protein GI | 239817922 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.601689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCA TTGCCTCCCG TCCCGCCCAG CCCATCAAGC TCTACGGCAG CGCCATCTCG GGCCACGTGC ACCGGGTGCG GCTATTCCTC TCGATGCTCG GCCTGCCTTT CGAAGTGATC GAGCTCGACC TGAAGCAGCG CGCCCACCGC ACGCCCGAGT TCCTGGCGCG CAACCCTTTC GGGCAGGTGC CGGTGATCGA GGACGGCGAA ACCACGCTGG CCGATTCCAA CGCGATCCTG GTCTACCTCA ACGAGCGCTA TTCGGCCGAT CCGGCGCGCT GGATGCCGCG CGACCCGGTG GGCGCGGCGC GCGTGCAGCG CTGGTTCTCG GTGGCCGCGG GGCCGCTGGC CTACGGGCCG GCCGCCGCGC GCGTCATGGC GCTGTTCGGC CTGGCCGCCG ATCCCGCCGA GACGGTGACG CGCTCGCATG CGCTGCTCGC GGTGATGGAG ATCCACCTCG GGCAGCAGCC TTTCCTGGCC GGGCCCGCGG CCACGCTGGC CGACATCGCG AACTACGCCT ACGTGGCGCA TGCGCCCGAA GGCCGCGTCT CGCTCGATGC GTACCCGCAG GTGCGCGCCT GGCTCGGGCG CGTGGAGGCG CTGCCCGGCT TCGTGCCGAT GGTGCGCACG CCGGTCGGCC TTGCGGCGGC GGCATCATGA
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Protein sequence | MNAIASRPAQ PIKLYGSAIS GHVHRVRLFL SMLGLPFEVI ELDLKQRAHR TPEFLARNPF GQVPVIEDGE TTLADSNAIL VYLNERYSAD PARWMPRDPV GAARVQRWFS VAAGPLAYGP AAARVMALFG LAADPAETVT RSHALLAVME IHLGQQPFLA GPAATLADIA NYAYVAHAPE GRVSLDAYPQ VRAWLGRVEA LPGFVPMVRT PVGLAAAAS
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