Gene Vapar_4959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4959 
Symbol 
ID7974241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5270971 
End bp5271681 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content75% 
IMG OID644795554 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_002946829 
Protein GI239817919 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACGC GTTCTTCTTC CCCGGCTTTT TCCTCCAACG CCGACGTGCA ACTGGCCCGC 
CTGGCCGGCG CCATCGCCGA GCCCGCGCGC GCCCGCATGC TGGGCTGCCT GATGGACGGC 
CATGCGCGCA CCGCGACCGA GCTTGCCACC GTGGCCGAGG TGGCCGCCTC CACCGCCAGC 
GCGCACCTCG CGCGCCTCAA GGAAGAGCGG CTGGTCGAGC TGCTCGTGCA GGGCAAGCAC 
CGCTACTTCC GGCTGGCGGG CGACAACGTG GCGGCCGCGC TCGAAAGCCT GATGGTGGTG 
GCCGGCGCGC CGCACGCCGC GCAGTTCAAG CCCAGCACGC CGAGCCGCCT GCGCGCCGCG 
CGCACCTGCT ACGACCACAT GGCCGGCGCC GCCGGCGTCG CGCTGCACGA CCGGCTGCAT 
GCGCAGGGCT GGCTCAGCGG CCTGCAGAGC GGCTCGTACG AGCTCACGCC CGAAGGCGCG 
ATCGCGCTGG AGAGCCTGGG CGTGGAGGTG GATGCGGTGC GCCGCTCGCG CCGGCGCTTT 
GCCTGCGCCT GCCTCGACTG GAGCGAGCGC CGCCCGCACC TGGGCGGCGC GCTCGGCGCG 
GCCTGGCTCC AGCTGTCGCT GCGCCGCGGC TGGGTGCGCC AGGAGCTGGA CGGCCGCGCG 
CTCGCGCTCA CGCCCAAGGC GCAGCGCGAG ATGCCCGAGC TCTTTGCCTG A
 
Protein sequence
MDTRSSSPAF SSNADVQLAR LAGAIAEPAR ARMLGCLMDG HARTATELAT VAEVAASTAS 
AHLARLKEER LVELLVQGKH RYFRLAGDNV AAALESLMVV AGAPHAAQFK PSTPSRLRAA 
RTCYDHMAGA AGVALHDRLH AQGWLSGLQS GSYELTPEGA IALESLGVEV DAVRRSRRRF 
ACACLDWSER RPHLGGALGA AWLQLSLRRG WVRQELDGRA LALTPKAQRE MPELFA