Gene Vapar_4902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4902 
Symbol 
ID7971596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp5216564 
End bp5217151 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content69% 
IMG OID644795497 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_002946772 
Protein GI239817862 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.185466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTT CGGTTTCACG CCCGCTGCCG CTGGCCGACA CGCCAGCCGT CGTGCTCCTG 
ACGCCGGAGG AACCCGCCGA ACTCGATGCG GCGCGCGCGA TCTTCCGCGA CTACGCCGCC 
TCGCTGGACA TCGACCTGTG CTTCCAGAAT TTCGAGGAAG AGGTCGCCAC GCTGCCTGGC 
GACTACGCCG AGCCGCGCGG CGCCCTGCTG CTCGCGCTGG TCGATGCCGC CCACATCAAG 
GAGGAAGCCG GGCAACGCGC GCCGACCCTC ATGCGCGCCA ATGGCACGCT GGCGCACGTG 
GCCGGCTGCT GCGCGCTGCG CCCGCTCGAC AACACCGACT ACGCCAATGC CGCGGAGATG 
AAGCGGCTGT TCGTGCGGCC CGGCTTTCGG GGGCTGGGCG TCGGGCGGCA GCTTGCCGAA 
GCCATCCTCG ACGCCGCGCG CGGCGCAGGC TATGCCTGCG TGCTGCTCGA CACGCTGGAC 
GACATGGAAT CGGCCCGCGC GCTCTACGAA GACCTGGGAT TCGAGGAAGT GCCGCCCTAC 
TATCACAACC CGATCGCGGG CGCGCACTAC CTCAAGGTGG ACCTTTAG
 
Protein sequence
MSFSVSRPLP LADTPAVVLL TPEEPAELDA ARAIFRDYAA SLDIDLCFQN FEEEVATLPG 
DYAEPRGALL LALVDAAHIK EEAGQRAPTL MRANGTLAHV AGCCALRPLD NTDYANAAEM 
KRLFVRPGFR GLGVGRQLAE AILDAARGAG YACVLLDTLD DMESARALYE DLGFEEVPPY 
YHNPIAGAHY LKVDL