Gene Vapar_4874 details

Gene Information

• Locus tag: Vapar_4874
• ID: 7971568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 5193491
• End bp: 5193961
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644795469
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_002946744
• Protein GI: 239817834
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCATTA CCGGTACCCT GATCGTTCAG ATGATCGTGT TCCTGATCCT GGTCGGGTTC 
ACGATGAAGT TCGTGTGGCC GCCGATCGCG AAGGCGCTGG ACGACCGCGC TGCGAAGATC 
GCCGAAGGCC TCGCTGCCGC CGACAAGGCC AAGTCCGAAC TCTCCGCCGC CAACAAGCGC 
GTGGAAGCCG AACTGGGCCA GGCACGCAAC GAGTCCGCAC AACGTCTTGC CGACGCCGAA 
CGTCGCGCCC AGGCCATCGT TGAAGAGGCC AAGGCCCGCG CGACCGAGGA AGGCAACAAG 
ATCGTTGCAG CCGCACGCGT CGAAGCCGAC CAGCAGGCAC TGAAGGCGCG CGAAGCACTG 
CGCGAGCAAG TCGCGGCCCT GGCTGTCAAG GGCGCAGAGC AGATCCTGCG CAAGGAAGTG 
AATGCAGGCG TTCACGCCGA TTTGCTCGCC CGCCTGCAGA CCGAACTCTG A 

 

Protein sequence

MSITGTLIVQ MIVFLILVGF TMKFVWPPIA KALDDRAAKI AEGLAAADKA KSELSAANKR 
VEAELGQARN ESAQRLADAE RRAQAIVEEA KARATEEGNK IVAAARVEAD QQALKAREAL 
REQVAALAVK GAEQILRKEV NAGVHADLLA RLQTEL