| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4863 |
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| Symbol | |
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| ID | 7971557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5181744 |
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| End bp | 5182907 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795458 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_002946733 |
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| Protein GI | 239817823 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA CACCTCCCCG CAAGCTCCGC TGCGCCATGG TCGGCGGCGG CCGCGACGCC
TTCATCGGCG CCGTGCACCG CAACGCCATG GCGCTCGACG GGCAGATCGA GCTCGTGGCC
GGCGCGCTGT CGTCGAGTCC GGACAAGGCG CGCGCCTCGG GCCGCGACCT GCACCTGGCC
GACGGCCGCA ACCACGGCGA CTGGCAGTCG CTGCTGGCCG ACGAGCTCAA GCGCCCGCCC
GAGGAGCGCA TCGACTTCGT CTCGATCGTC ACGCCCAACC ATGTGCACTT CCCGGTCGCG
CAGGCTTTCG TGGAAGCCGG CTTCCATGTG GTGTGCGACA AGCCGCTGGT GCACACGCGC
GCGCAGGCCG ATGCGCTGGT CGCGGCCGTG AAGAAGCAGG GCACGCTGTT CGGCGTGACC
TACAACTACA CCGGCTATCC GATGGTGCGG CAGGCGCGCG AGATGGTCCG CTCTGGCCGG
CTCGGCGAGC TGCGCAAGGT GGTGGTCGAA TACAACCAGG GCTGGCTCGC GAGCCAGCTC
GAAGGCGCCG GCAACAAGCA GGCCGACTGG CGCACCGACC CCGCGCGGAG CGGCGCGGCC
GGCGCCATCG GCGACATCGG ATCGCACGCC GAGAACCTGG TCGCGAGCGT CACCGGCCTG
GAGATCGAGA GCCTGTGCGC CGACCTGAGC GCGCTGGTGC CGGGCCGCAT GCTCGACGAC
GACGGCAGCC TGCTGCTGCG CTTCAAGGGC GGCGCGCGCG GCGTGCTGAT TGCCTCGCAG
ATCAACACCG GCCTGGAGAA CGACCTGCGG CTGCGCGTGT CGGGCACGCT CGGCACGCTC
GAATGGCGGC AGGAGCAGCC GAGCCAGCTG GTGCACCTGC CGCACGACGG GCCGAAGCAG
ATCTTCACGC GCGGCTCGCC CTGGCTGTGC GAGGCGGCGC AGCGCGCCAG CCGCCTGCCG
GCCGGCCATC CCGAAGGCTT CATCGAGGCC TTTGCCAACG TCTACGCCGG CGTGGTGGCG
GACATCCGCG CGCGGAACGC AGGCCAGCCG GCCGATCCCA TCGCGGCCGA CTACCCGCGC
GTGGAAGACG GCGCGCGCGG CGTGCGCTTC ATCGAGCGCA CGGTGGCCTC GGCCCAAAGC
GAATCAAAAT GGACGCCCTG GTAG
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| Protein sequence | MSDTPPRKLR CAMVGGGRDA FIGAVHRNAM ALDGQIELVA GALSSSPDKA RASGRDLHLA
DGRNHGDWQS LLADELKRPP EERIDFVSIV TPNHVHFPVA QAFVEAGFHV VCDKPLVHTR
AQADALVAAV KKQGTLFGVT YNYTGYPMVR QAREMVRSGR LGELRKVVVE YNQGWLASQL
EGAGNKQADW RTDPARSGAA GAIGDIGSHA ENLVASVTGL EIESLCADLS ALVPGRMLDD
DGSLLLRFKG GARGVLIASQ INTGLENDLR LRVSGTLGTL EWRQEQPSQL VHLPHDGPKQ
IFTRGSPWLC EAAQRASRLP AGHPEGFIEA FANVYAGVVA DIRARNAGQP ADPIAADYPR
VEDGARGVRF IERTVASAQS ESKWTPW
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