| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4849 |
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| Symbol | |
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| ID | 7971543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5167594 |
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| End bp | 5168745 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795444 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002946719 |
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| Protein GI | 239817809 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGACG CCACGCTCGC GGCCATCGCG CAGCCGGCGC AGACCGATCC GGAGGCCGCG
CAACGCGCAC GTCGCCAGCC GCTGGCGCGC CGGCGCTATG CGCTGGAGAT CCGCCAGCAC
ATGGGATGGC GGCGGCAGGC GCTGATCCTT GCGGCGGCGC TCCTTGCGGG CCTTGCGATC
TCCGCCGCCA TCCTGGTGGC GGCCGGCGTT CCCGCCAACG AACTCGCCAA CGAGTTCGTG
ATGCAGACCT TCTTCGACGG CCAGAACTTT CGCGCCGTGC TGTTCCAGGC CGCCCCCATG
ATCCTCGTCG GCCTGGCTGG CGCGCTGGCG TTTCGCGCGC GCTTCTGGAA CCTGGGGCTC
GAGGGCCAGA TGATCTGGGG CGCCATCGGC GCGACGGCCG TCTCGATGTG GCAGATCGGG
CCCGAGCCGC TGCGCCTGCC GCTGATGTTC GCGGCCGCCA TCGGCTGCGG GCTGCTCTGG
GTGCTGGGGC CGGCGTGGCT GAAGATCAGG CTCGGCGTGA ACGAGATCAT TTCCACGCTG
ATGCTCAACT ACATGGCGGC CAACTTCCTG CTGCACCTGG TCTATGGCAG CTGGAAGGAC
CCGAAGGACA ACTTCCCCTA TTCGCCGCAG TTCCGCGCCT TCGAGCGGCT GCCCGAACTG
GGGGCCGGCG TGAGCAGCGC GATCGTGCTC GCGGCCGTGG TGGCGCTCCT TGCATGGTGG
CTGGTGGGCC TGAGCCGCGC CGGGCTGTAC CTGCGCTTCG TCGATGCCAA TCCGCGCGTG
GCGCATGCCA ATGGGGTGCC GGTGCGCCGC ACCATCTACG GCGCCGTGTT GCTGTCGGGC
GCGATGGCCG GGCTCGCGGG CCTGGCGGTG GCCTCCGGGC AGGAAGGGCG GCTCACGCAG
GCCTTCTACC AGGGGTACGG CTTCTCGGGC ATCCTGATTG CCTTTCTTGC GCGCAACAAC
CCGCTCGCGG CCACGGTGGT GGCGCTGCTG GTGGCGGCCC TGTTCGTCAC CGGCCGCAGC
CTGCAGGTGT TCTACCAGGT GCCGTTCTCG ATGGTGCAGC TGATCCAGGC CATCATCGTG
GTGTGCGTCG CATCGAGCGA TTTCTTCATT CGCCATCGGT TGCGCCGCGT GGGTGCGGAG
GCGGTGCAAT GA
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| Protein sequence | MVDATLAAIA QPAQTDPEAA QRARRQPLAR RRYALEIRQH MGWRRQALIL AAALLAGLAI
SAAILVAAGV PANELANEFV MQTFFDGQNF RAVLFQAAPM ILVGLAGALA FRARFWNLGL
EGQMIWGAIG ATAVSMWQIG PEPLRLPLMF AAAIGCGLLW VLGPAWLKIR LGVNEIISTL
MLNYMAANFL LHLVYGSWKD PKDNFPYSPQ FRAFERLPEL GAGVSSAIVL AAVVALLAWW
LVGLSRAGLY LRFVDANPRV AHANGVPVRR TIYGAVLLSG AMAGLAGLAV ASGQEGRLTQ
AFYQGYGFSG ILIAFLARNN PLAATVVALL VAALFVTGRS LQVFYQVPFS MVQLIQAIIV
VCVASSDFFI RHRLRRVGAE AVQ
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