| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4847 |
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| Symbol | |
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| ID | 7971541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5164928 |
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| End bp | 5166043 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795442 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_002946717 |
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| Protein GI | 239817807 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATGC TGCTGCGCAC TCCCACCCAC GGCTTCGCCT TCGGCCTTGC ATCGGCGCTT
GCGGCCGGCG GCGCGCTGTT CACGCTGCCC GCCGTGGCGG CCGACGGCTT CACGCTCAAG
GACAAGCCGA AAATCGCAAT GCTCTACTTC GGCCCGAAGA ACGACGGCGG CTGGACGCAG
GCCTTCGACG AGGCGCGCGT GAAGATCGAG AAGGAGATCG GCCAGAAGAT CCAGTTCGTC
GAGAACGTGC CCGAAGACGC ATCGGCCATC AAGCCCGCGG CCGAGAAGTT CATCCAGCGC
GGCGCCAACA TCGTGATCGG CACCGCCTTC GGCTACTCCG ACAGTTTCAA GGACCTGGCC
GCCAAGTACC CGGAGGTGGC TTTTCTCAAC GGCTCTGGCA CCACCAACGG CAGCAACCTC
GAGTCGTTCT ACGGCCGCAC CTACGAGAGC CAGTACCTCT GCGGCATGGC GGCGGGCGCG
GCCTCCAAGA CCGGCAAGCT CGGCTTCGTC GCGGCCAACC CCTTCGGCGT GGTGAACTGG
ACCATCAATG CCTTCGCGCT CGGTGCGCAG AAGATGAACC CCAGCGCCAC GGTCAACGTG
ATCTACACCG GCGCCTGGAA CGACCCGGTG AAGGAACGCG CCGCCGCGGC CGCGCTGATC
GACCAGGGCG CCGACGTGAT CGGCCAGCAT GTCGATTCGC CCACGCCGCA GATCGTGGCG
CAGGAGCGCG GCGTGTACGG CACCGGCCAC CACCGCGACC TGCGCCAGTT CGCGCCCAAG
GCCACGCTGT GCTCGTCGGT GTGGGTGTGG GACCGCTTCC TTTCGCCAGA GCTCAAGAAG
ATCATGGCCG GCAACTGGAA GCCCGGCCAG TACGGCGCCT TCATCGAGAT GAAGGACGGC
GGCACCGACA TCGCGGGCTT CGGCCCTGCG GTGCCCAAGG ACAAGGCGTC GCAGATCACG
GCCGAACGAG ACGCCATCAT GAAGGGCAAG CAGGTCTACG CCGGCCCGCT CGCCGACCGC
GACGGCAAGG AGCGCGTGGC CAAGGGCGCG GTGCTGTCGG ATGCCGATCT CTGGAAGATG
GACTGGTTCG TCAAGGGCGT GGTCACGCAG AAGTAA
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| Protein sequence | MLMLLRTPTH GFAFGLASAL AAGGALFTLP AVAADGFTLK DKPKIAMLYF GPKNDGGWTQ
AFDEARVKIE KEIGQKIQFV ENVPEDASAI KPAAEKFIQR GANIVIGTAF GYSDSFKDLA
AKYPEVAFLN GSGTTNGSNL ESFYGRTYES QYLCGMAAGA ASKTGKLGFV AANPFGVVNW
TINAFALGAQ KMNPSATVNV IYTGAWNDPV KERAAAAALI DQGADVIGQH VDSPTPQIVA
QERGVYGTGH HRDLRQFAPK ATLCSSVWVW DRFLSPELKK IMAGNWKPGQ YGAFIEMKDG
GTDIAGFGPA VPKDKASQIT AERDAIMKGK QVYAGPLADR DGKERVAKGA VLSDADLWKM
DWFVKGVVTQ K
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