Gene Vapar_4825 details

Gene Information

• Locus tag: Vapar_4825
• ID: 7970295
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 5143284
• End bp: 5144015
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644795420
• Product: glutathione S-transferase-like protein
• Protein accession: YP_002946696
• Protein GI: 239817786

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.674415
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACCT ATCAACTCCA CTACTGGCCC ACCATCCAGG GCCGCGGGGA ATTCGTGCGG 
CTCGCGCTCG AGGCGGCCGG TGCGGACTAT GTCGACGTGG CGCGGCTGCC CGAATCGAAG 
GGCGGCGGCG GGTCCGCACT GGGCGACCGG CTCGACGACC CCGACATCGT CCGCCCTTCG 
TTCGCGCCGC CGTTCCTGAT CGACGGCGAC ATCGTCGTGG GGCAGACCGC GGCCATCCTG 
CTGTACCTGG GGCCGCGGCT GGGCCTTTCG GGCGTCGGCG AATCCGACGG CCTCTGGACG 
CACCAGCTGC AGCTCACCAT CGCCGACGTG GTGGCCGAGG CGCACGACAC GCACCACCCG 
ATCTCCACCG GCGCCTACTA CGAAGACCAG CGCGATGCGG CGGTGCAGCG CGCGCGGGCC 
TTCCGCGAAG AGCGGATACC CAAGTACCTG AACTGGTTCG AGCGCGTGCT GCAGCGCAAC 
CCCGCGGGGC CGTCGCACCT CGTGGGCGAT GTGCTGACCT ATGCCGACCT GTCGCTGTTC 
CAGCTGGTGG ACGGCCTGCG CTACGCCTTC CCGAAAGCCG CGGCCCGGGC GCTGGCCGCC 
ACGCCGGCGG TCGAGAAGCT GCACGACAAC GTCCGGCGCC GCCAGCGCGT GCACGACTAC 
CTGCAAAGCC CGCGCCGCAT CGCGTTCAAC GAGGACGGGA TCTTCAGGCG GTATGCGGAG 
CTGGATGGCT GA 

 

Protein sequence

MTTYQLHYWP TIQGRGEFVR LALEAAGADY VDVARLPESK GGGGSALGDR LDDPDIVRPS 
FAPPFLIDGD IVVGQTAAIL LYLGPRLGLS GVGESDGLWT HQLQLTIADV VAEAHDTHHP 
ISTGAYYEDQ RDAAVQRARA FREERIPKYL NWFERVLQRN PAGPSHLVGD VLTYADLSLF 
QLVDGLRYAF PKAAARALAA TPAVEKLHDN VRRRQRVHDY LQSPRRIAFN EDGIFRRYAE 
LDG