| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4820 |
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| Symbol | |
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| ID | 7970290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5138148 |
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| End bp | 5138987 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644795415 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002946691 |
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| Protein GI | 239817781 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCGC GAACCGTGAA TAAGAACGTC CGCCAGGCGG ACGTTTCGGC CCGCGCCGCG
GCCGCGCGCA TCTCCAGCGC AGAGCCCGGC GACGACCCCG GCAGCCGCAC GCTGCGGCGC
GGCCTGCAGT TGCTGGACGC GGTGCTGGCC AGCGGCCGCG AAGGCCTGCG CGTGGTCGAC
CTGTGCCGCG CAGCGGGGCT GGAGCGCGCC ACGGTGCACC GCCTGCTGGC CACGCTGGTG
GAGAGCGGCT ATGCCGCGCA GCGCGGGCGC TTTCGCTATG TGGCGGGGCC GCGGCTCGCG
GCCATGGCGC AACCGGCCGG CATGCCCAAC ATGGCGGTGC GCCTGCGTCC GGTGCTGGAG
CGCGTGAGTG CGGCCTGCGG CGATGCGGCT TTCGCGATCG TGCGCGAAGG CCCGGCGTCG
CATTGCATCG CGCGCCATGT GGGCACGCAC CCGGTGCAGA TCCTGGTGAT CCAGGTGGGC
ACGCGCCAGC CGCTGGGTGT GGGCGCGGCG GGCCTGGCGC TGCTGTCGGC GCTGCCCGAC
GACGAGGTCC ATGCCGCCGT CGCCGCCAAT GCGCGTGTGC TGGGCCGCTA CGGCGGCATG
ACGCCGGAGC GCATGGCGCT GCTGGTGCGC GCGACGCGCG AGCGCGGCTG GTCGGTCATC
GGCAACCATG CCACCGACGG CGTGCTGGCC GTGGGCATGG CGGTGCGCAG CAGCGAAGGC
GAGCCTGTGG CCGCGATCAG CGTGGCGTCG ACCCTGGACC GCATGCCGCG CGAGCGCCAG
CAGCTGATCG CGCGCTGGAT GCGCGAGGCA CTGGCCGCGC TGCTGCCGGG CGGGCTTTGA
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| Protein sequence | MPSRTVNKNV RQADVSARAA AARISSAEPG DDPGSRTLRR GLQLLDAVLA SGREGLRVVD
LCRAAGLERA TVHRLLATLV ESGYAAQRGR FRYVAGPRLA AMAQPAGMPN MAVRLRPVLE
RVSAACGDAA FAIVREGPAS HCIARHVGTH PVQILVIQVG TRQPLGVGAA GLALLSALPD
DEVHAAVAAN ARVLGRYGGM TPERMALLVR ATRERGWSVI GNHATDGVLA VGMAVRSSEG
EPVAAISVAS TLDRMPRERQ QLIARWMREA LAALLPGGL
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