| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4782 |
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| Symbol | |
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| ID | 7970252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5094552 |
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| End bp | 5095331 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644795377 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_002946653 |
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| Protein GI | 239817743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.122497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGCT GGCGCATCCA GCCCGCGGCG GACACCATGC TGTCCGCCGC CCTCGCCGGC
GACGTGCTCG CGGGCATCGG CACGCCGCAC CTGGCGGCCA GCTGCCTTGC GGCCATGCAC
CGCGTGATGC CCGTCACCTT CTGCACCGTG TTCGCGGTCG ACGCCACCGG CCGCATCGAG
GCGGTGTCGG CCGCCAGCAG CTACGGCACC ACGGCCGAAC GCACGGCCGA GCGCTACGTG
GCGCAGCGCT TCGACCTGCT CGATCCCAAC ATGACCTGGC TGGCGGCGCG CAAGCTGCCC
CGGCGCGCGC AGCTCTGGCT GGGCCACCAG CGCGCCGACG AGGTGGCCGA CCCGGCCTAC
CGCGCGGCCT GCTACGGCGA CGTGGGCATC CGCGAGCGCG CGTCGGTGCT GCGCCTGACG
CCCACCGGCC AGCGCGTGGC CGTGAGCTTC TACCGGAGCC TCGCGCAGCC CGAATTCGGC
GCCGCCGACT TCGCGGCCAT CGAGCGCCAC GCCACGCTCC TGGCCGACGC CACGCTGGCC
CATGGCCGCA GCGCCATGGC CGCCCGCGAA GCGGTGGCGC CCACGCTCGC CTCGCGCCTT
CTCACCCTGA GCCTGCGCGA GCGCGAAGTC ATCGGCCACC TGATGGCCGG CCGCACAGCC
AAGGAAGCGG CGCGCGAAAT CGGCATCGAA CTGACGACGG TGCGCACCCA CCAGTACCGG
GCGTTCCGGC GGCTGGGGAT ACGCAGCCAG AAGGAGCTGC TGCGCGCCGC GCCGCGCTAG
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| Protein sequence | MRRWRIQPAA DTMLSAALAG DVLAGIGTPH LAASCLAAMH RVMPVTFCTV FAVDATGRIE
AVSAASSYGT TAERTAERYV AQRFDLLDPN MTWLAARKLP RRAQLWLGHQ RADEVADPAY
RAACYGDVGI RERASVLRLT PTGQRVAVSF YRSLAQPEFG AADFAAIERH ATLLADATLA
HGRSAMAARE AVAPTLASRL LTLSLREREV IGHLMAGRTA KEAAREIGIE LTTVRTHQYR
AFRRLGIRSQ KELLRAAPR
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