| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4767 |
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| Symbol | |
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| ID | 7971777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5064897 |
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| End bp | 5065697 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795352 |
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| Product | Prephenate dehydratase |
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| Protein accession | YP_002946638 |
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| Protein GI | 239817728 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.678819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGCA CGTTCTCGAT CGGCTTGACC CTCACTGCGG CAACCGCCGC TGTTCTTCTT
TCGGGCTGCG CCATGGCGCC GGCCGCCCCG GCGGGCGGCT CGCACCTCGA CGCGGTGCAG
AAGGCGGCGG TGCTGCGCAT CTGCACGCCG GGCGACTACA AGCCCTTCAG CTTCCAGAAG
GCCGACGGCG CGTTCGAGGG CATCGACGTC GATCTCATGG CGGGCTTCAG CGCCAGCCTC
GGCGCCAAGC CCGAATGGGT CAAGACCACC TGGGCCAACC TGCTGCCCGA CCTCGGCGCC
GGCAAGTGCG ACATCGCCGT GGGCGGCGTT TCCGTGACCA CCGACCGGCA AAAGCGCGCC
TTCTTCAGCG CGCCCTACAT GGTGAACGGC AAGGCGCCCA TTGCGCGCTG CGCCGACGTT
GCCAAGTACC AGAGCGTGGC CGACATCGAC AAGCCTTCCA CCCGCGTGAT CTTCAATCCG
GGCGGCAGCA ACGAGCGCTT TGCGCGCGCC AACTTCAAGC AGGCCAAGCT CACGCTGCAC
GGCGAGAACG TGACGATCTT CGACGAGATC CTTGCCAACC GCGCCGACGT GTTCGTGACC
GAATCCGCCG AAGCCATCAC GCAGCAGAAG CTCAAGCCGG GCCTGTGCGC GATCAACCCC
GACAAGCCGC TGCAATACGG CGAAATGGCC TGGATGCTGC CGCGCGACGA CGTGGCCTTC
AAGGCCTACG TCGACCAATG GCTGCACCTG CAGCAAGCCG GCGGCGACTT CCAGCGCGTG
ATGGACCGCT GGCTCAAATA A
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| Protein sequence | MRSTFSIGLT LTAATAAVLL SGCAMAPAAP AGGSHLDAVQ KAAVLRICTP GDYKPFSFQK
ADGAFEGIDV DLMAGFSASL GAKPEWVKTT WANLLPDLGA GKCDIAVGGV SVTTDRQKRA
FFSAPYMVNG KAPIARCADV AKYQSVADID KPSTRVIFNP GGSNERFARA NFKQAKLTLH
GENVTIFDEI LANRADVFVT ESAEAITQQK LKPGLCAINP DKPLQYGEMA WMLPRDDVAF
KAYVDQWLHL QQAGGDFQRV MDRWLK
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