| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4756 |
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| Symbol | |
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| ID | 7971766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5053455 |
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| End bp | 5054792 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795341 |
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| Product | Amidohydrolase 3 |
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| Protein accession | YP_002946627 |
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| Protein GI | 239817717 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.34117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGC CCGCGCTGCT CGGTAATGCG CGCCTGCCGC GCTGGCTGCT GCCGGCCGGC
TGGCCAGAGC GCGACGGCGT GCCGGTGCTG GCGCGCATCG CGCTCGAGGC CGGCCGCGTG
CAGTCGGTGC GGCCCGCTTC CGGCCCGGAC GAGCCCCATC CCGAAGCATG GGACCTGGCC
GGCACGCTGG TGCTGCCGGG CTTCGTCGAC GCCCACACGC ACCTGGACAA GGCCTTCACG
CTGCCGCGCA TGAAAAAGGT GCAGCCCGGC CTGCTCGGCG CCATCGACGC CATGCTGGCC
GACCGCGTGC ACTGGAACGC CGCCGACGTG CACGAGCGCG CCGCGCGCGG CCTGCAGTGG
GCCTGGGAAT GCGGCACCAC GCATGTGCGC ACGCATGTCG ACTGGTGGGA GCCCGACACG
GTGCCGCTGG CCTGGCCCGT GATGGCCGAG CTCGCGCAGG AATGGGCCGG CAGGGTACGG
CTGGAGCAGG TCAGCCTCAT CAAGCTGCCG CTGTTCGAGG ACGCCGCGCA GGCCCTGCGG
CTTGCCAGGC AGGTGAAGGC CACCGGGCCG CATGCGCTGC TTGGCGGCTT CGTGCATTCC
ACCAACTGGA GCGAGAACGC GCTGCGCAAC CTGCTGGTGG CGGCGCAGGC CTGCGATCTC
GACGTCGACC TGCATGTCGA TGAAGAACTG AATTCCGCGG CAGCCGGCCT GCAAACCACC
GCACGCATCC TGCGCGAGAT CGGCTTCGAA GGCCGCGTGG TCTGCGGCCA CGTCTGTGCG
CTGGCCGCGC AGCCCGAGGC GGAGGCCCTT GCCACGCTCG ATGCCGTCGC ACGCGCGCCG
ATCACCATCG TCTCGCTGCC CGCCACCAAC CTGCTGCTGC AGGACGCGGT GACGGGCCGC
ACGCCGCGCC TGCGCGGCCT CACGCTGGTG AAGGAAGCGC GCGAACGCGG CATTCCGCTG
CTGTTTGCGA GCGACAACGT GCAGGACCCG TTCTGCCGCC TCGGCAGCTT CGACCCGGTC
GAGGCGCTGG GCACGGCCGC GCTCGTCGCC CAACTGCCCG ATCCCTTCGA CGACTGGTCG
CAGGCGCTGT GCCGCGGCGA CTGGCTGCAG CGCGCCCCCC GCCACGGCGG CGCCCACGCT
GGTGGGCGCC AAGGCCGACC TCGTGCTGTT CACCCAGGCC GACCGCCATG GCTGGCCTTC
GCGCAGCGCC ACCCGCGTGG TGCTGCGCGA GGGCCGCGTC ACGCATGGCG ACGCGGCGCC
CTTCCTTCCC CGCTGACGAA CAAAGGAACC CCATGCTCCA CGGCTACATC CCGCCCCACC
GCTTCCTGCC CTACCTGA
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| Protein sequence | MKAPALLGNA RLPRWLLPAG WPERDGVPVL ARIALEAGRV QSVRPASGPD EPHPEAWDLA
GTLVLPGFVD AHTHLDKAFT LPRMKKVQPG LLGAIDAMLA DRVHWNAADV HERAARGLQW
AWECGTTHVR THVDWWEPDT VPLAWPVMAE LAQEWAGRVR LEQVSLIKLP LFEDAAQALR
LARQVKATGP HALLGGFVHS TNWSENALRN LLVAAQACDL DVDLHVDEEL NSAAAGLQTT
ARILREIGFE GRVVCGHVCA LAAQPEAEAL ATLDAVARAP ITIVSLPATN LLLQDAVTGR
TPRLRGLTLV KEARERGIPL LFASDNVQDP FCRLGSFDPV EALGTAALVA QLPDPFDDWS
QALCRGDWLQ RAPRHGGAHA GGRQGRPRAV HPGRPPWLAF AQRHPRGAAR GPRHAWRRGA
LPSPLTNKGT PCSTATSRPT ASCPT
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