| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4716 |
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| Symbol | |
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| ID | 7971726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5010523 |
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| End bp | 5011260 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795301 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002946587 |
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| Protein GI | 239817677 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGTGA AAACAGCGTT TCGCGTGATC GAGATCGTCG AGCTCTTTGC CCGGGAGAAG
CAGCCGCTGG CGCTGTCCGA GATGGCGCGC CTGCTCGAGA TGCCGGTGTC CAGCTGCCTC
GGGCTGATCC GCACGCTCGA AGAGCAGGGC TACATGTACG AGACCGGCCG CCGCCAGGGC
TACTACCCGA CCGGCCGGCT GCTGGCCATG GCGCAGGTCA TTGCGGCGCA CGACCCGGTG
CTCGACCGCG TGCGGCCCGC GCTGGAGGAG CTGCGCGACG GTGCGCGCGA GACCGTGCTG
TTCGGCAAGT TCCGCGACCC GAACACGGTC GTCTACCTGG AAGTGCTGAG CGCGCCGCAG
AGCATCCGCT ATTCCGCCGA AGCGGGCGAG ACGCGCCCGG CCTACGCCAA TTCGATGGGC
CGCGCGCTGC TCTCCACGCT CGCGCCCGAG GCGCGCCGCA AGCTGCTGGC AGCCACGCCG
CTGGCGCCGC TGACCGACGC CACGCTGACC ACGCCCGAGG CCATCGAGCA GGAGCTCGAA
CGCTCGCCCG CGCGCGGCTG GTACGGCAAC CTCGGCGAAA GCATCCCCGA CCTCGTCGGC
CTTGCATGGC CGCTGCGCAT CGGCGGCGAG GCCTATGCCA TCTCGGTGGC GGGCCCGCGC
TACCGGCTCG AGCCGCGCAT CGACGAGGCG GCCGCCATGC TGCGCTCCGC CTGCCTGGCC
ATCGAACACA AAGGCTGA
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| Protein sequence | MVVKTAFRVI EIVELFAREK QPLALSEMAR LLEMPVSSCL GLIRTLEEQG YMYETGRRQG
YYPTGRLLAM AQVIAAHDPV LDRVRPALEE LRDGARETVL FGKFRDPNTV VYLEVLSAPQ
SIRYSAEAGE TRPAYANSMG RALLSTLAPE ARRKLLAATP LAPLTDATLT TPEAIEQELE
RSPARGWYGN LGESIPDLVG LAWPLRIGGE AYAISVAGPR YRLEPRIDEA AAMLRSACLA
IEHKG
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