| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4715 |
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| Symbol | |
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| ID | 7971725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5010131 |
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| End bp | 5010514 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795300 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_002946586 |
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| Protein GI | 239817676 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCCC CACGCTACTT CGTCCGCGAA AGCGACATCG CCGGCTACCA CCCGGCCAAC
CACACCGGCA CGCTCAACAA GCGGCTGATC GGCCCCGAGA CCGTGGGCGC GAAGCAGCTC
GAGGTGCTGG TCGGCCACAT CCAGAAGGGC AAGGGCGCGC TGCCCCATGC GCACCCGGGC
ATCGAGCAGG TCTGCTACAT GCTCGAAGGC CGCGCGGTCG CCGAGGTGGG CGGCCAGCGG
CAGGAGCTGC ACCCGGGCGA CAGCTGCTTT TTTCCGGCCG ATGCGATGCA CACCTTCACG
GTGGTGAGCG ACGAGCCGGT GCGCGTGCTG GTCATCTACA GCCCGCCGTA TGAGGAATCG
CCGGAGCGCG TGATCCGGCC CTGA
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| Protein sequence | MTSPRYFVRE SDIAGYHPAN HTGTLNKRLI GPETVGAKQL EVLVGHIQKG KGALPHAHPG
IEQVCYMLEG RAVAEVGGQR QELHPGDSCF FPADAMHTFT VVSDEPVRVL VIYSPPYEES
PERVIRP
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