| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4693 |
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| Symbol | |
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| ID | 7971703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4981946 |
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| End bp | 4982995 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795278 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_002946564 |
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| Protein GI | 239817654 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0961162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCT TCATCGATGT TCACAGCCTG GTTCGCCTGG TGGACGAAAC CGGCGTTCCG
CAATTCCTCA AGGCCCTGGC CGACGCGCTG CGCGACGACT TCCTGCGCTG GCGCGAGTTC
GACAAGAAGG CGCGCGTGGC CAGCCACTCG CACCTCGGCG TGATCGAGCT GATGCCGGTG
GCCGACGACG GCGCCTACGC CTTCAAGTAC GTCAACGGCC ATCCGCACAA CACGGCCGTG
GGGCTGCCCA CGGTCATGGC CTTCGGCGTG CTGGCCGAGG TCGACACGGG CTACCCCGTG
CTGCTGTCCG AGCTCACGCT CACCACCGCG CTGCGCACCG CCGCCACTTC GGCCATGGCG
GCGCAGGCGC TGGCGCGGCC CGGCTCGCGC AGCATGGCGC TGATCGGCAA CGGCTCGCAG
AGCGAGTTCC AGGCGCTGGC CTTCCATGCG CTGCTGGGTA TCGAGGAGGT GCGCGTGTTC
GACATCGATC CGCGCGCCAC CGACAAGCTG GTGCGCCACC TGTCGGCCTG CACGCCGCTC
GAGGTGGTGC GCGCGCCATC GGTCGCCGAC GCGGTGCGCG GCGCCGACAT CGTGACCACG
GTCACGGCAC ACCAGGGCCA CGCGGTCGTG CTTTCGCCCG GCATGATCGA GCCGGGCATG
CACATCAATG CGGTGGGCGG CGATTCCCCC GGCAAGACCG AGCTGCATCC CGACGTGCTG
CGCCTCGCCC GCGTGTTCGT CGAGTACGAA GCCCAGACCC GCATCGAGGG CGAGATCCAG
CAGCTGCCGG CCGACTTTCC GGTGCACGAG CTCTGGAAGG TGCTGCTCGG CAGCGTGCCG
GGGCGCGAGA GTGCCGAGCA GGTCACGGTG TTCGACTCGG TCGGCTTTGC GCTGGAGGAC
TACACGGCGC TGCGCTACAT CCACCAGCTG TCGCTGGAGC GCGGCATCGG CCAGCAGATC
GCGCTGGTGC CCGAACTCGA CGACCCGAAG GACCTGTTCG GGCTGACGGC GTCCGGCCGG
CGCCGGGCGG TGCTGCGGCG TGCGGCATGA
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| Protein sequence | MTRFIDVHSL VRLVDETGVP QFLKALADAL RDDFLRWREF DKKARVASHS HLGVIELMPV
ADDGAYAFKY VNGHPHNTAV GLPTVMAFGV LAEVDTGYPV LLSELTLTTA LRTAATSAMA
AQALARPGSR SMALIGNGSQ SEFQALAFHA LLGIEEVRVF DIDPRATDKL VRHLSACTPL
EVVRAPSVAD AVRGADIVTT VTAHQGHAVV LSPGMIEPGM HINAVGGDSP GKTELHPDVL
RLARVFVEYE AQTRIEGEIQ QLPADFPVHE LWKVLLGSVP GRESAEQVTV FDSVGFALED
YTALRYIHQL SLERGIGQQI ALVPELDDPK DLFGLTASGR RRAVLRRAA
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