| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4688 |
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| Symbol | |
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| ID | 7972899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4977019 |
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| End bp | 4977861 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795273 |
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| Product | putative ABC transporter permease protein |
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| Protein accession | YP_002946559 |
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| Protein GI | 239817649 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCCGC GCGAGCTGCT GCGCCCCTAT GCCGCGGCCT TCGTGTCGCG CTTCATGCAG
ATGCTGCAGT ACCGCACGGC GGCGCTCGCC GGCTTTGCCA CGCAGTGCTG GTGGGGCGGC
ATCAAGGTGA TGGTGTTCGC GGCGTTCTAC GGCGGCAGCG CCGCCGCAGG CGCGGCGTCG
CCGATGTCGC TCGCCCAGGC CGTCAGCTAC ACCTGGCTCG CGCAAGGCCT GCTGGTGCTG
CTGCCCTGGC TCGGCGACCC CGAGGTGGCG CAGGCCGTGC GCACCGGCGC GGTCGCCTAC
GACCGTTTGC GGCCGGTGGA TGCGTACGCA CTGTGGTTCG CGCGCAGCGC CGGCTGGATC
GCAGCGCGGC TGCTGCCGCG GGTGGCGCTG ATGGCGGCCT TCGCGGCGGT CGCGCTGCCG
CTGGCGGGGC TCGGCGAATG GGCCTGGCAG CCGCCCGCGA ATGCGGTGGC CGGCCTGGCG
TTCCTGCTGT CGATCGGGCT CGCGCTGCTG CTGTCCACCG CGATGGTGAT GCTGCTCAAC
GTGGCGGCCA CGGCGGCGCT CAACGAGCGC GGCATCAGCG CGGTGGCCAC CCCCGTGGTC
ATCGTGTTCT CGGGCAACCT GCTGCCGCTG GCGCTGCTGC CCGACGCTTG GCAGGCCGCG
CTGCTGGTGC AGCCGCTGGC GGGGCTGTTC GACATTCCGG CGCGGCTGTA CTTCGGGCAG
CTGAGCGGCT GGCATGCCAT GGGTGCGTTG GGGCTGCAGT GCTTCTGGAT CGCTCTGCTG
GTCGCGTTCG GGCGCCTCGC GATGGGGCGC ACGATGCGCA GTCTGCAGGT GCAGGGTGGC
TAG
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| Protein sequence | MSPRELLRPY AAAFVSRFMQ MLQYRTAALA GFATQCWWGG IKVMVFAAFY GGSAAAGAAS
PMSLAQAVSY TWLAQGLLVL LPWLGDPEVA QAVRTGAVAY DRLRPVDAYA LWFARSAGWI
AARLLPRVAL MAAFAAVALP LAGLGEWAWQ PPANAVAGLA FLLSIGLALL LSTAMVMLLN
VAATAALNER GISAVATPVV IVFSGNLLPL ALLPDAWQAA LLVQPLAGLF DIPARLYFGQ
LSGWHAMGAL GLQCFWIALL VAFGRLAMGR TMRSLQVQGG
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