| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4679 |
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| Symbol | |
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| ID | 7972890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4967925 |
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| End bp | 4968887 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795264 |
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| Product | protein of unknown function DUF519 |
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| Protein accession | YP_002946550 |
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| Protein GI | 239817640 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0752119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGTT ACCGCCACGC CTTCCACGCC GGCAACCACG CCGACGTGCT CAAGCACACG
GTGCTGATTG CCACGCTCGA CCACCTGCTC GAAAAAGAGG CAGCGCTGAC CGTGGTCGAC
ACCCACGCCG GCGCCGGCCT GTACCGCCTG GACGGCGACT ACGCCGGCAC CAGCGGCGAG
GCCGCCGAAG GCGTGCTGCG CCTGCTGGCG GACAAGAAAG CACCTGCCGC CCCGGCCCCT
GCCGCCAAAT CCGCCGCCAA GTCCGCCGCC AAGAAGGCAG CCCCCGAAGC CGAGGCGCCC
CTGGCCGATG CGATTGCGCG CTACCTGAGC GTGATCCACG ACTTCAACCC CAAGGGCGGC
GCCCGCATCT ATCCGGGTTC GCCTTTCATC GTGCAGCACC TGCTGCGCGA CCACGACAAG
CTCAAGCTGT TCGAGCTGCA CCCCACCGAT GCCCGCACGC TGGACGCCAA CATCGCCCAG
CTCGAGGCGG GCCGGCAGAT CGCGGTGCTG CGCGAGGACG GCTTCGGCAG CGCCACCAAG
TTCCTGCCGC CGCCCTCGCG CCGCGCGCTG GTGCTGATGG ACCCGAGCTA CGAGATCAAG
AGCGACTACG GCCGCGTGCT CGACTTCGCG GCCGAGGCGC TCAAGCGCTT TGCCACCGGC
ACCTACGCCA TCTGGTATCC GATCATTCCG CGCCCCGAGG CGCACGACCT GCCGCGCCGG
CTCAAGACCC TGGCCACCAA GGCCGGCAAG CCCTGGCTGC ACGCCACGCT CACGGTCAAG
TCGAGCAAGC TGACCACCAC GCCCACGGGT GAAACCCAGC GCCCGGGCCT GCCGGCCAGC
GGCATGTTCC TGATCAACCC GCCCTACACG CTGAAGCCGC TGCTTGCGGC CGCGCTGCCC
CAGCTGGCGG AGCGGCTGGC GCAGGACCGG AACGCCACCT TCTCGCTCGA CGCGGGCGGC
TAG
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| Protein sequence | MFSYRHAFHA GNHADVLKHT VLIATLDHLL EKEAALTVVD THAGAGLYRL DGDYAGTSGE
AAEGVLRLLA DKKAPAAPAP AAKSAAKSAA KKAAPEAEAP LADAIARYLS VIHDFNPKGG
ARIYPGSPFI VQHLLRDHDK LKLFELHPTD ARTLDANIAQ LEAGRQIAVL REDGFGSATK
FLPPPSRRAL VLMDPSYEIK SDYGRVLDFA AEALKRFATG TYAIWYPIIP RPEAHDLPRR
LKTLATKAGK PWLHATLTVK SSKLTTTPTG ETQRPGLPAS GMFLINPPYT LKPLLAAALP
QLAERLAQDR NATFSLDAGG
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