| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4663 |
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| Symbol | |
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| ID | 7972874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4954662 |
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| End bp | 4955615 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795248 |
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| Product | phosphatidate cytidylyltransferase |
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| Protein accession | YP_002946534 |
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| Protein GI | 239817624 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4589] Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCT CCGCTTCCAC CCAGACCACG CTGCAGTTGT TCGGCGGCGT GGCCGGCGTG
CTGATCCTCG CCTCGTCCAT CGGCGCGCTG CTCAAGTGGC GTGTGGCGGC GGAGCAGCCG
AACTCGGTGA TCGACAACCT CAATGCGCGC GTCAATGCCT GGTGGGTGAT GGTCGCGGTG
ATCGGCCTGT CCTTCGCGTT CGGCAAGGGC GGCGTGATCG TGCTGTTCTA CCTGATCTCG
TTCTATGCGC TGCGCGAGTT CATCAGCCTG GCCTACACCC GGCGCGGCGA CCATCATGCG
ATTGCGGCCG CTTTCTACAT CGGGCTGCCG GTGCAGTATT TTTTGGTGTG GATCGACTGG
TACGGGCTCT ATTCGATCTT CATCCCGGTC TACGCCTTCC TCGTGCTGCC GATTCTCGCG
GCCGTGGGCG GCGACACGCA GCGCTTTCTG GAGCGCACCT CCAAGATCCA GTGGGGCCTG
ATGGTCTGCG TGTTCTGCAT CAGCCACGTG CCCGCGCTGC TCACGCTGCA GATCCCCGGT
TTCGAAGGCC GTAACCTGCT GCTGATCGCG TTTCTCGTGA TCGTTGTGCA GGGCAGCGAC
GTGCTGCAGT ACGTGTGGGG CAAGCTCTTC GGCCGGCGCA AGGTGGCGCC CGAGCTCTCG
CCTTCCAAGA CCTGGGAAGG CCTGGTAGGC GGCGTGGCCA GCGCGACGGC ATTGGGCGCG
GCGCTCTACT GGGCCACGCC GTTCAACCCC TGGCAGGCCG CGCTGATGGC GCTCACCATC
TGCCTCATGG GCTTCTTCGG CGGGCTCGTG ATGTCGGCCA TCAAGCGCGA CCGCGGCGTG
AAGGACTGGG GCTCGATGAT CGAAGGCCAC GGCGGCATGC TCGACCGGCT CGACTCGGTG
ATCTTCGCGG CGCCGATCTA CTTCCACGCC TTGCGCTACT GGTGGGTGCC GTGA
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| Protein sequence | MNISASTQTT LQLFGGVAGV LILASSIGAL LKWRVAAEQP NSVIDNLNAR VNAWWVMVAV
IGLSFAFGKG GVIVLFYLIS FYALREFISL AYTRRGDHHA IAAAFYIGLP VQYFLVWIDW
YGLYSIFIPV YAFLVLPILA AVGGDTQRFL ERTSKIQWGL MVCVFCISHV PALLTLQIPG
FEGRNLLLIA FLVIVVQGSD VLQYVWGKLF GRRKVAPELS PSKTWEGLVG GVASATALGA
ALYWATPFNP WQAALMALTI CLMGFFGGLV MSAIKRDRGV KDWGSMIEGH GGMLDRLDSV
IFAAPIYFHA LRYWWVP
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