| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4656 |
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| Symbol | |
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| ID | 7972867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4947600 |
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| End bp | 4948559 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795241 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_002946527 |
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| Protein GI | 239817617 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACCC ATGACCTGAG TGCCTGGCAG CACGACCATC ATTTCGGCGC AGGCAACGAA
TCGGCCGAGC GCAGCACCCG CCTCGTGATG TGGATCACCG CCGCGATGAT GGTGGTCGAG
ATCGGCGCCG GCTGGTGGTT CAACTCCATG GCGCTCTTGG CCGACGGCTG GCACATGAGC
TCGCATGCGC TGGCCATCGG CCTGAGCGCC TTTGCCTATG CGGCGGCGCG GCGCTATGCA
TGCGATCCGC GCTTTGCCTT CGGCACCTGG AAGATCGAGG TGCTGGGCGG CTTTGCGAGC
GCGCTGATGC TGCTCGGCGT CGCGGCGCTG ATGGTGGTGG GCTCGATCGA GCGGCTTCTC
TCGCCTTCGG TCATCCACTA CCGCGAAGCC GTGGCGGTGG CCGTGCTCGG GCTGGTGGTC
AACCTGGTCT GCGCGCGGCT GCTGGGGGCG GCGCACCATC ATGGGCATGG GCACGACCAT
GGCCATGATG CGCACCATCA CCACGAGGGC CATGACCACG CGCACGGCCA CGACCTGAAC
CTGCGCTCCG CCTACCTGCA CGTGGTGGCC GATGCCGCCA CCTCGGTGCT GGCCATCGGC
GCGCTGCTCG GCGGCTGGTT CTTCGGCTGG TCCTGGCTCG ACCCGGTGAT GGGCATCGTC
GGCGCGGTGC TGGTGGCCGT GTGGGCCAAG GGCCTGCTCA AGGAAACCGG CAAGGTGCTG
CTCGACCGCG AGATGGACCA TCCCGTGACG GCCGAGATCC GCGAAGGCGT CGAAACCATG
CTGGCCGATT CGGAAACCCG CGTGGCCGAC CTGCACGTGT GGCGCGTGGG CCGCGAGGCC
TATGCCTGCG CGCTCACGGT GGTGACGCAT TCGCCCACGC TCACGGCGGA CGAGGTGCGG
GCCTGCTTCT CGATGCACGA GGAGATCCGC CACTCGACCG TGGAAATCCA GCGCTGCTGA
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| Protein sequence | MHTHDLSAWQ HDHHFGAGNE SAERSTRLVM WITAAMMVVE IGAGWWFNSM ALLADGWHMS
SHALAIGLSA FAYAAARRYA CDPRFAFGTW KIEVLGGFAS ALMLLGVAAL MVVGSIERLL
SPSVIHYREA VAVAVLGLVV NLVCARLLGA AHHHGHGHDH GHDAHHHHEG HDHAHGHDLN
LRSAYLHVVA DAATSVLAIG ALLGGWFFGW SWLDPVMGIV GAVLVAVWAK GLLKETGKVL
LDREMDHPVT AEIREGVETM LADSETRVAD LHVWRVGREA YACALTVVTH SPTLTADEVR
ACFSMHEEIR HSTVEIQRC
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